Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
UPF3BQ9BZI7 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
UPF3BQ9BZI7 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
UPF3BQ9BZI7 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
UPF3BQ9BZI7 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC19.79■□□□□ 0.76
UPF3BQ9BZI7 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC19.79■□□□□ 0.76
UPF3BQ9BZI7 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC19.79■□□□□ 0.76
UPF3BQ9BZI7 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC19.79■□□□□ 0.76
UPF3BQ9BZI7 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
UPF3BQ9BZI7 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
UPF3BQ9BZI7 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
UPF3BQ9BZI7 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
UPF3BQ9BZI7 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
UPF3BQ9BZI7 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
UPF3BQ9BZI7 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC19.79■□□□□ 0.76
UPF3BQ9BZI7 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
UPF3BQ9BZI7 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
UPF3BQ9BZI7 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
UPF3BQ9BZI7 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
UPF3BQ9BZI7 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
UPF3BQ9BZI7 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
UPF3BQ9BZI7 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
UPF3BQ9BZI7 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
UPF3BQ9BZI7 AL590627.1-203ENST00000421194 1026 ntBASIC19.79■□□□□ 0.76
UPF3BQ9BZI7 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC19.79■□□□□ 0.76
UPF3BQ9BZI7 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
UPF3BQ9BZI7 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC19.79■□□□□ 0.76
UPF3BQ9BZI7 ACTL9-202ENST00000612068 1252 ntBASIC19.79■□□□□ 0.76
UPF3BQ9BZI7 AC005593.1-201ENST00000624894 515 ntBASIC19.79■□□□□ 0.76
UPF3BQ9BZI7 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
UPF3BQ9BZI7 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC19.79■□□□□ 0.76
UPF3BQ9BZI7 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
UPF3BQ9BZI7 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
UPF3BQ9BZI7 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
UPF3BQ9BZI7 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
UPF3BQ9BZI7 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC19.79■□□□□ 0.76
UPF3BQ9BZI7 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
UPF3BQ9BZI7 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC19.79■□□□□ 0.76
UPF3BQ9BZI7 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
UPF3BQ9BZI7 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC19.79■□□□□ 0.76
UPF3BQ9BZI7 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
UPF3BQ9BZI7 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC19.79■□□□□ 0.76
UPF3BQ9BZI7 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
UPF3BQ9BZI7 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
UPF3BQ9BZI7 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
UPF3BQ9BZI7 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
UPF3BQ9BZI7 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC19.78■□□□□ 0.76
UPF3BQ9BZI7 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
UPF3BQ9BZI7 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
UPF3BQ9BZI7 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
UPF3BQ9BZI7 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
UPF3BQ9BZI7 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC19.78■□□□□ 0.76
UPF3BQ9BZI7 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
UPF3BQ9BZI7 REXO1L8P-201ENST00000604378 1897 ntBASIC19.78■□□□□ 0.76
UPF3BQ9BZI7 PCGF3-213ENST00000620529 1899 ntBASIC19.78■□□□□ 0.76
UPF3BQ9BZI7 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
UPF3BQ9BZI7 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
UPF3BQ9BZI7 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC19.78■□□□□ 0.76
UPF3BQ9BZI7 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
UPF3BQ9BZI7 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
UPF3BQ9BZI7 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC19.78■□□□□ 0.76
UPF3BQ9BZI7 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
UPF3BQ9BZI7 AC092910.1-201ENST00000482027 1129 ntBASIC19.78■□□□□ 0.76
UPF3BQ9BZI7 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC19.78■□□□□ 0.76
UPF3BQ9BZI7 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC19.78■□□□□ 0.76
UPF3BQ9BZI7 WT1-AS_2.1-201ENST00000613208 137 ntBASIC19.78■□□□□ 0.76
UPF3BQ9BZI7 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC19.78■□□□□ 0.76
UPF3BQ9BZI7 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
UPF3BQ9BZI7 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC19.78■□□□□ 0.76
UPF3BQ9BZI7 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC19.78■□□□□ 0.76
UPF3BQ9BZI7 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
UPF3BQ9BZI7 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC19.78■□□□□ 0.76
UPF3BQ9BZI7 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC19.78■□□□□ 0.76
UPF3BQ9BZI7 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
UPF3BQ9BZI7 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
UPF3BQ9BZI7 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC19.78■□□□□ 0.76
UPF3BQ9BZI7 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC19.78■□□□□ 0.76
UPF3BQ9BZI7 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC19.78■□□□□ 0.76
UPF3BQ9BZI7 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
UPF3BQ9BZI7 AC010491.1-201ENST00000563101 2797 ntBASIC19.78■□□□□ 0.76
UPF3BQ9BZI7 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
UPF3BQ9BZI7 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
UPF3BQ9BZI7 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
UPF3BQ9BZI7 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
UPF3BQ9BZI7 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
UPF3BQ9BZI7 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
UPF3BQ9BZI7 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
UPF3BQ9BZI7 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC19.77■□□□□ 0.76
UPF3BQ9BZI7 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
UPF3BQ9BZI7 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
UPF3BQ9BZI7 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
UPF3BQ9BZI7 SLC9A3P2-201ENST00000447821 2021 ntBASIC19.77■□□□□ 0.76
UPF3BQ9BZI7 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC19.77■□□□□ 0.76
UPF3BQ9BZI7 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
UPF3BQ9BZI7 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
UPF3BQ9BZI7 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
UPF3BQ9BZI7 MRPL20P1-201ENST00000400819 433 ntBASIC19.77■□□□□ 0.76
UPF3BQ9BZI7 CDK2AP2P3-201ENST00000422476 372 ntBASIC19.77■□□□□ 0.76
UPF3BQ9BZI7 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC19.77■□□□□ 0.76
UPF3BQ9BZI7 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC19.77■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms