Protein–RNA interactions for Protein: Q9BQP9

BPIFA3, BPI fold-containing family A member 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BPIFA3Q9BQP9 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC18.31■□□□□ 0.52
BPIFA3Q9BQP9 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC18.31■□□□□ 0.52
BPIFA3Q9BQP9 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
BPIFA3Q9BQP9 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC18.31■□□□□ 0.52
BPIFA3Q9BQP9 AL049597.2-201ENST00000565575 961 ntBASIC18.31■□□□□ 0.52
BPIFA3Q9BQP9 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
BPIFA3Q9BQP9 SDCCAG3P1-201ENST00000589292 1150 ntBASIC18.31■□□□□ 0.52
BPIFA3Q9BQP9 MTDHP3-201ENST00000594186 672 ntBASIC18.31■□□□□ 0.52
BPIFA3Q9BQP9 MTDHP4-201ENST00000600287 670 ntBASIC18.31■□□□□ 0.52
BPIFA3Q9BQP9 AC069148.1-201ENST00000608741 768 ntBASIC18.31■□□□□ 0.52
BPIFA3Q9BQP9 AC092119.3-201ENST00000612618 583 ntBASIC18.31■□□□□ 0.52
BPIFA3Q9BQP9 WT1-AS_2.1-201ENST00000613208 137 ntBASIC18.31■□□□□ 0.52
BPIFA3Q9BQP9 AL355877.3-201ENST00000622820 899 ntBASIC18.31■□□□□ 0.52
BPIFA3Q9BQP9 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
BPIFA3Q9BQP9 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC18.31■□□□□ 0.52
BPIFA3Q9BQP9 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
BPIFA3Q9BQP9 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
BPIFA3Q9BQP9 BID-213ENST00000615414 2236 ntTSL 5 BASIC18.31■□□□□ 0.52
BPIFA3Q9BQP9 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
BPIFA3Q9BQP9 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
BPIFA3Q9BQP9 DKFZP434H168-201ENST00000567381 1905 ntBASIC18.31■□□□□ 0.52
BPIFA3Q9BQP9 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
BPIFA3Q9BQP9 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC18.31■□□□□ 0.52
BPIFA3Q9BQP9 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC18.3■□□□□ 0.52
BPIFA3Q9BQP9 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
BPIFA3Q9BQP9 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
BPIFA3Q9BQP9 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC18.3■□□□□ 0.52
BPIFA3Q9BQP9 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC18.3■□□□□ 0.52
BPIFA3Q9BQP9 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
BPIFA3Q9BQP9 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
BPIFA3Q9BQP9 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
BPIFA3Q9BQP9 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
BPIFA3Q9BQP9 LCK-206ENST00000373564 2137 ntTSL 5 BASIC18.3■□□□□ 0.52
BPIFA3Q9BQP9 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC18.3■□□□□ 0.52
BPIFA3Q9BQP9 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC18.3■□□□□ 0.52
BPIFA3Q9BQP9 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
BPIFA3Q9BQP9 SART3-203ENST00000546611 1184 ntBASIC18.3■□□□□ 0.52
BPIFA3Q9BQP9 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
BPIFA3Q9BQP9 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC18.3■□□□□ 0.52
BPIFA3Q9BQP9 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
BPIFA3Q9BQP9 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
BPIFA3Q9BQP9 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
BPIFA3Q9BQP9 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC18.3■□□□□ 0.52
BPIFA3Q9BQP9 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC18.3■□□□□ 0.52
BPIFA3Q9BQP9 AC092850.2-201ENST00000623821 2697 ntBASIC18.3■□□□□ 0.52
BPIFA3Q9BQP9 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
BPIFA3Q9BQP9 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
BPIFA3Q9BQP9 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC18.3■□□□□ 0.52
BPIFA3Q9BQP9 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC18.3■□□□□ 0.52
BPIFA3Q9BQP9 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
BPIFA3Q9BQP9 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
BPIFA3Q9BQP9 PAN3-AS1-201ENST00000563843 1351 ntBASIC18.3■□□□□ 0.52
BPIFA3Q9BQP9 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC18.29■□□□□ 0.52
BPIFA3Q9BQP9 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC18.29■□□□□ 0.52
BPIFA3Q9BQP9 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC18.29■□□□□ 0.52
BPIFA3Q9BQP9 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
BPIFA3Q9BQP9 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
BPIFA3Q9BQP9 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
BPIFA3Q9BQP9 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
BPIFA3Q9BQP9 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
BPIFA3Q9BQP9 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
BPIFA3Q9BQP9 DPM2-202ENST00000373110 738 ntTSL 2 BASIC18.29■□□□□ 0.52
BPIFA3Q9BQP9 COPS8-203ENST00000409334 794 ntTSL 5 BASIC18.29■□□□□ 0.52
BPIFA3Q9BQP9 ELK2BP-201ENST00000415014 1224 ntBASIC18.29■□□□□ 0.52
BPIFA3Q9BQP9 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC18.29■□□□□ 0.52
BPIFA3Q9BQP9 FGFR3P6-201ENST00000457012 610 ntBASIC18.29■□□□□ 0.52
BPIFA3Q9BQP9 MSRA-206ENST00000521209 814 ntTSL 3 BASIC18.29■□□□□ 0.52
BPIFA3Q9BQP9 MMP17-203ENST00000535004 719 ntTSL 3 BASIC18.29■□□□□ 0.52
BPIFA3Q9BQP9 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
BPIFA3Q9BQP9 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC18.29■□□□□ 0.52
BPIFA3Q9BQP9 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
BPIFA3Q9BQP9 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
BPIFA3Q9BQP9 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
BPIFA3Q9BQP9 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
BPIFA3Q9BQP9 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC18.29■□□□□ 0.52
BPIFA3Q9BQP9 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC18.29■□□□□ 0.52
BPIFA3Q9BQP9 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
BPIFA3Q9BQP9 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
BPIFA3Q9BQP9 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC18.29■□□□□ 0.52
BPIFA3Q9BQP9 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC18.29■□□□□ 0.52
BPIFA3Q9BQP9 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
BPIFA3Q9BQP9 CROCCP1-201ENST00000426910 5675 ntBASIC18.29■□□□□ 0.52
BPIFA3Q9BQP9 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC18.29■□□□□ 0.52
BPIFA3Q9BQP9 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
BPIFA3Q9BQP9 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC18.29■□□□□ 0.52
BPIFA3Q9BQP9 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
BPIFA3Q9BQP9 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
BPIFA3Q9BQP9 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
BPIFA3Q9BQP9 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
BPIFA3Q9BQP9 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
BPIFA3Q9BQP9 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC18.28■□□□□ 0.52
BPIFA3Q9BQP9 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
BPIFA3Q9BQP9 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
BPIFA3Q9BQP9 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
BPIFA3Q9BQP9 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
BPIFA3Q9BQP9 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
BPIFA3Q9BQP9 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC18.28■□□□□ 0.52
BPIFA3Q9BQP9 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC18.28■□□□□ 0.52
BPIFA3Q9BQP9 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
BPIFA3Q9BQP9 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms