Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC21.57■■□□□ 1.04
ABCA3Q99758 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC21.57■■□□□ 1.04
ABCA3Q99758 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC21.57■■□□□ 1.04
ABCA3Q99758 KLK3-211ENST00000597483 810 ntTSL 2 BASIC21.57■■□□□ 1.04
ABCA3Q99758 AL118558.3-201ENST00000607414 1079 ntBASIC21.57■■□□□ 1.04
ABCA3Q99758 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
ABCA3Q99758 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
ABCA3Q99758 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
ABCA3Q99758 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ABCA3Q99758 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC21.57■■□□□ 1.04
ABCA3Q99758 AC004408.2-201ENST00000623613 2777 ntBASIC21.56■■□□□ 1.04
ABCA3Q99758 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
ABCA3Q99758 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC21.56■■□□□ 1.04
ABCA3Q99758 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
ABCA3Q99758 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC21.56■■□□□ 1.04
ABCA3Q99758 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
ABCA3Q99758 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
ABCA3Q99758 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
ABCA3Q99758 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC21.56■■□□□ 1.04
ABCA3Q99758 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
ABCA3Q99758 MIR326-201ENST00000362220 95 ntBASIC21.56■■□□□ 1.04
ABCA3Q99758 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
ABCA3Q99758 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC21.56■■□□□ 1.04
ABCA3Q99758 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
ABCA3Q99758 BAATP1-201ENST00000412284 1225 ntBASIC21.56■■□□□ 1.04
ABCA3Q99758 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC21.56■■□□□ 1.04
ABCA3Q99758 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC21.56■■□□□ 1.04
ABCA3Q99758 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC21.56■■□□□ 1.04
ABCA3Q99758 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC21.56■■□□□ 1.04
ABCA3Q99758 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC21.56■■□□□ 1.04
ABCA3Q99758 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
ABCA3Q99758 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
ABCA3Q99758 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
ABCA3Q99758 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
ABCA3Q99758 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC21.55■■□□□ 1.04
ABCA3Q99758 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC21.55■■□□□ 1.04
ABCA3Q99758 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ABCA3Q99758 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
ABCA3Q99758 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ABCA3Q99758 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC21.55■■□□□ 1.04
ABCA3Q99758 CNN2P8-201ENST00000421872 913 ntBASIC21.55■■□□□ 1.04
ABCA3Q99758 VDAC1P7-201ENST00000462417 847 ntBASIC21.55■■□□□ 1.04
ABCA3Q99758 AC091804.1-201ENST00000486888 567 ntBASIC21.55■■□□□ 1.04
ABCA3Q99758 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC21.55■■□□□ 1.04
ABCA3Q99758 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC21.55■■□□□ 1.04
ABCA3Q99758 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC21.55■■□□□ 1.04
ABCA3Q99758 AMT-206ENST00000458307 1860 ntTSL 2 BASIC21.55■■□□□ 1.04
ABCA3Q99758 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ABCA3Q99758 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ABCA3Q99758 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
ABCA3Q99758 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
ABCA3Q99758 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ABCA3Q99758 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
ABCA3Q99758 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
ABCA3Q99758 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ABCA3Q99758 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC21.55■■□□□ 1.04
ABCA3Q99758 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ABCA3Q99758 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ABCA3Q99758 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC21.55■■□□□ 1.04
ABCA3Q99758 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
ABCA3Q99758 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
ABCA3Q99758 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
ABCA3Q99758 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC21.55■■□□□ 1.04
ABCA3Q99758 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
ABCA3Q99758 FXNP2-201ENST00000411625 547 ntBASIC21.55■■□□□ 1.04
ABCA3Q99758 AC134915.1-201ENST00000426461 574 ntBASIC21.55■■□□□ 1.04
ABCA3Q99758 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ABCA3Q99758 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
ABCA3Q99758 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
ABCA3Q99758 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC21.54■■□□□ 1.04
ABCA3Q99758 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC21.54■■□□□ 1.04
ABCA3Q99758 GATB-213ENST00000515812 1893 ntTSL 5 BASIC21.54■■□□□ 1.04
ABCA3Q99758 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC21.54■■□□□ 1.04
ABCA3Q99758 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
ABCA3Q99758 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
ABCA3Q99758 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC21.54■■□□□ 1.04
ABCA3Q99758 AC016694.1-201ENST00000434179 700 ntBASIC21.54■■□□□ 1.04
ABCA3Q99758 KRT8P13-201ENST00000463294 1010 ntBASIC21.54■■□□□ 1.04
ABCA3Q99758 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC21.54■■□□□ 1.04
ABCA3Q99758 AC022137.2-201ENST00000503482 481 ntBASIC21.54■■□□□ 1.04
ABCA3Q99758 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC21.54■■□□□ 1.04
ABCA3Q99758 COG4-212ENST00000564653 590 ntTSL 5 BASIC21.54■■□□□ 1.04
ABCA3Q99758 AC107373.2-201ENST00000607735 490 ntBASIC21.54■■□□□ 1.04
ABCA3Q99758 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
ABCA3Q99758 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC21.54■■□□□ 1.04
ABCA3Q99758 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC21.54■■□□□ 1.04
ABCA3Q99758 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
ABCA3Q99758 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
ABCA3Q99758 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
ABCA3Q99758 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
ABCA3Q99758 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC21.54■■□□□ 1.04
ABCA3Q99758 AL645728.1-201ENST00000366221 2101 ntBASIC21.54■■□□□ 1.04
ABCA3Q99758 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
ABCA3Q99758 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC21.53■■□□□ 1.04
ABCA3Q99758 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC21.53■■□□□ 1.04
ABCA3Q99758 U82695.1-201ENST00000635752 1889 ntBASIC21.53■■□□□ 1.04
ABCA3Q99758 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
ABCA3Q99758 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
ABCA3Q99758 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
ABCA3Q99758 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms