Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDK5RAP1Q96SZ6 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
CDK5RAP1Q96SZ6 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
CDK5RAP1Q96SZ6 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC17.14■□□□□ 0.33
CDK5RAP1Q96SZ6 RARRES2P9-201ENST00000565168 469 ntBASIC17.14■□□□□ 0.33
CDK5RAP1Q96SZ6 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDK5RAP1Q96SZ6 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC17.14■□□□□ 0.33
CDK5RAP1Q96SZ6 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDK5RAP1Q96SZ6 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDK5RAP1Q96SZ6 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CDK5RAP1Q96SZ6 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDK5RAP1Q96SZ6 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CDK5RAP1Q96SZ6 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC17.14■□□□□ 0.33
CDK5RAP1Q96SZ6 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDK5RAP1Q96SZ6 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC17.14■□□□□ 0.33
CDK5RAP1Q96SZ6 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDK5RAP1Q96SZ6 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC17.14■□□□□ 0.33
CDK5RAP1Q96SZ6 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDK5RAP1Q96SZ6 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CDK5RAP1Q96SZ6 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDK5RAP1Q96SZ6 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CDK5RAP1Q96SZ6 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
CDK5RAP1Q96SZ6 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC17.13■□□□□ 0.33
CDK5RAP1Q96SZ6 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDK5RAP1Q96SZ6 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDK5RAP1Q96SZ6 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDK5RAP1Q96SZ6 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC17.13■□□□□ 0.33
CDK5RAP1Q96SZ6 RPL28-205ENST00000558131 444 ntTSL 5 BASIC17.13■□□□□ 0.33
CDK5RAP1Q96SZ6 AC106028.4-201ENST00000614509 607 ntBASIC17.13■□□□□ 0.33
CDK5RAP1Q96SZ6 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDK5RAP1Q96SZ6 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDK5RAP1Q96SZ6 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC17.13■□□□□ 0.33
CDK5RAP1Q96SZ6 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
CDK5RAP1Q96SZ6 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.13■□□□□ 0.33
CDK5RAP1Q96SZ6 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDK5RAP1Q96SZ6 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
CDK5RAP1Q96SZ6 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC17.13■□□□□ 0.33
CDK5RAP1Q96SZ6 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC17.13■□□□□ 0.33
CDK5RAP1Q96SZ6 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDK5RAP1Q96SZ6 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17.12■□□□□ 0.33
CDK5RAP1Q96SZ6 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CDK5RAP1Q96SZ6 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CDK5RAP1Q96SZ6 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDK5RAP1Q96SZ6 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDK5RAP1Q96SZ6 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
CDK5RAP1Q96SZ6 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
CDK5RAP1Q96SZ6 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CDK5RAP1Q96SZ6 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC17.12■□□□□ 0.33
CDK5RAP1Q96SZ6 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDK5RAP1Q96SZ6 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDK5RAP1Q96SZ6 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDK5RAP1Q96SZ6 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
CDK5RAP1Q96SZ6 AP3S2-216ENST00000617003 1561 ntBASIC17.12■□□□□ 0.33
CDK5RAP1Q96SZ6 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDK5RAP1Q96SZ6 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.12■□□□□ 0.33
CDK5RAP1Q96SZ6 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CDK5RAP1Q96SZ6 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC17.12■□□□□ 0.33
CDK5RAP1Q96SZ6 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDK5RAP1Q96SZ6 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CDK5RAP1Q96SZ6 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
CDK5RAP1Q96SZ6 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC17.12■□□□□ 0.33
CDK5RAP1Q96SZ6 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC17.12■□□□□ 0.33
CDK5RAP1Q96SZ6 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CDK5RAP1Q96SZ6 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CDK5RAP1Q96SZ6 AC024267.1-201ENST00000582320 895 ntBASIC17.12■□□□□ 0.33
CDK5RAP1Q96SZ6 AC018529.1-201ENST00000613063 361 ntBASIC17.12■□□□□ 0.33
CDK5RAP1Q96SZ6 MIR6080-201ENST00000617359 66 ntBASIC17.12■□□□□ 0.33
CDK5RAP1Q96SZ6 TUBB3P1-201ENST00000405796 1332 ntBASIC17.12■□□□□ 0.33
CDK5RAP1Q96SZ6 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC17.12■□□□□ 0.33
CDK5RAP1Q96SZ6 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
CDK5RAP1Q96SZ6 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDK5RAP1Q96SZ6 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CDK5RAP1Q96SZ6 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
CDK5RAP1Q96SZ6 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDK5RAP1Q96SZ6 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CDK5RAP1Q96SZ6 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDK5RAP1Q96SZ6 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDK5RAP1Q96SZ6 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC17.12■□□□□ 0.33
CDK5RAP1Q96SZ6 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CDK5RAP1Q96SZ6 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CDK5RAP1Q96SZ6 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CDK5RAP1Q96SZ6 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDK5RAP1Q96SZ6 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDK5RAP1Q96SZ6 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CDK5RAP1Q96SZ6 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CDK5RAP1Q96SZ6 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
CDK5RAP1Q96SZ6 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CDK5RAP1Q96SZ6 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDK5RAP1Q96SZ6 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDK5RAP1Q96SZ6 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC17.11■□□□□ 0.33
CDK5RAP1Q96SZ6 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC17.11■□□□□ 0.33
CDK5RAP1Q96SZ6 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC17.11■□□□□ 0.33
CDK5RAP1Q96SZ6 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC17.11■□□□□ 0.33
CDK5RAP1Q96SZ6 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CDK5RAP1Q96SZ6 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CDK5RAP1Q96SZ6 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
CDK5RAP1Q96SZ6 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
CDK5RAP1Q96SZ6 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC17.11■□□□□ 0.33
CDK5RAP1Q96SZ6 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC17.11■□□□□ 0.33
CDK5RAP1Q96SZ6 KLF2P3-201ENST00000451977 1087 ntBASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms