Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
SNX18Q96RF0 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SNX18Q96RF0 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SNX18Q96RF0 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
SNX18Q96RF0 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC15.17■□□□□ 0.02
SNX18Q96RF0 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SNX18Q96RF0 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SNX18Q96RF0 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
SNX18Q96RF0 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SNX18Q96RF0 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
SNX18Q96RF0 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
SNX18Q96RF0 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SNX18Q96RF0 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
SNX18Q96RF0 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
SNX18Q96RF0 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
SNX18Q96RF0 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SNX18Q96RF0 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SNX18Q96RF0 AC006058.4-201ENST00000624016 1670 ntBASIC15.16■□□□□ 0.02
SNX18Q96RF0 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SNX18Q96RF0 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SNX18Q96RF0 AL645728.1-201ENST00000366221 2101 ntBASIC15.16■□□□□ 0.02
SNX18Q96RF0 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SNX18Q96RF0 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SNX18Q96RF0 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
SNX18Q96RF0 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SNX18Q96RF0 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SNX18Q96RF0 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SNX18Q96RF0 EMD-201ENST00000369835 966 ntTSL 3 BASIC15.16■□□□□ 0.02
SNX18Q96RF0 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SNX18Q96RF0 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC15.16■□□□□ 0.02
SNX18Q96RF0 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SNX18Q96RF0 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC15.16■□□□□ 0.02
SNX18Q96RF0 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC15.16■□□□□ 0.02
SNX18Q96RF0 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC15.16■□□□□ 0.02
SNX18Q96RF0 AC079776.4-201ENST00000511039 504 ntBASIC15.16■□□□□ 0.02
SNX18Q96RF0 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SNX18Q96RF0 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC15.16■□□□□ 0.02
SNX18Q96RF0 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
SNX18Q96RF0 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
SNX18Q96RF0 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
SNX18Q96RF0 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
SNX18Q96RF0 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
SNX18Q96RF0 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
SNX18Q96RF0 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SNX18Q96RF0 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
SNX18Q96RF0 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC15.16■□□□□ 0.02
SNX18Q96RF0 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC15.16■□□□□ 0.02
SNX18Q96RF0 HLA-A-202ENST00000376806 1854 ntBASIC15.16■□□□□ 0.02
SNX18Q96RF0 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
SNX18Q96RF0 AL391256.1-201ENST00000443260 1855 ntBASIC15.16■□□□□ 0.02
SNX18Q96RF0 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
SNX18Q96RF0 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
SNX18Q96RF0 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SNX18Q96RF0 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SNX18Q96RF0 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SNX18Q96RF0 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SNX18Q96RF0 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC15.15■□□□□ 0.02
SNX18Q96RF0 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SNX18Q96RF0 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC15.15■□□□□ 0.02
SNX18Q96RF0 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC15.15■□□□□ 0.02
SNX18Q96RF0 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SNX18Q96RF0 AC243591.1-201ENST00000452967 1364 ntBASIC15.15■□□□□ 0.02
SNX18Q96RF0 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SNX18Q96RF0 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC15.15■□□□□ 0.02
SNX18Q96RF0 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
SNX18Q96RF0 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC15.15■□□□□ 0.02
SNX18Q96RF0 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC15.15■□□□□ 0.02
SNX18Q96RF0 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC15.15■□□□□ 0.02
SNX18Q96RF0 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC15.15■□□□□ 0.02
SNX18Q96RF0 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC15.15■□□□□ 0.02
SNX18Q96RF0 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SNX18Q96RF0 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC15.15■□□□□ 0.02
SNX18Q96RF0 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC15.15■□□□□ 0.02
SNX18Q96RF0 AP002469.2-201ENST00000531724 424 ntBASIC15.15■□□□□ 0.02
SNX18Q96RF0 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SNX18Q96RF0 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SNX18Q96RF0 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC15.15■□□□□ 0.02
SNX18Q96RF0 AC104692.2-201ENST00000603054 253 ntBASIC15.15■□□□□ 0.02
SNX18Q96RF0 AL121912.1-201ENST00000603683 238 ntBASIC15.15■□□□□ 0.02
SNX18Q96RF0 AL589182.2-201ENST00000619332 1049 ntBASIC15.15■□□□□ 0.02
SNX18Q96RF0 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC15.15■□□□□ 0.02
SNX18Q96RF0 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
SNX18Q96RF0 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
SNX18Q96RF0 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
SNX18Q96RF0 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC15.15■□□□□ 0.02
SNX18Q96RF0 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SNX18Q96RF0 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
SNX18Q96RF0 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
SNX18Q96RF0 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
SNX18Q96RF0 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
SNX18Q96RF0 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
SNX18Q96RF0 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC15.15■□□□□ 0.02
SNX18Q96RF0 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SNX18Q96RF0 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
SNX18Q96RF0 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
SNX18Q96RF0 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SNX18Q96RF0 AL009178.2-201ENST00000597278 2719 ntBASIC15.15■□□□□ 0.02
SNX18Q96RF0 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC15.14■□□□□ 0.01
SNX18Q96RF0 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SNX18Q96RF0 CICP13-201ENST00000422015 2789 ntBASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms