Protein–RNA interactions for Protein: Q96GM5

SMARCD1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1Q96GM5 PNMT-202ENST00000394246 821 ntTSL 2 BASIC17.37■□□□□ 0.37
SMARCD1Q96GM5 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
SMARCD1Q96GM5 AL645939.2-201ENST00000427340 991 ntBASIC17.37■□□□□ 0.37
SMARCD1Q96GM5 SPDYE14P-201ENST00000442619 822 ntBASIC17.37■□□□□ 0.37
SMARCD1Q96GM5 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
SMARCD1Q96GM5 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC17.37■□□□□ 0.37
SMARCD1Q96GM5 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC17.37■□□□□ 0.37
SMARCD1Q96GM5 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC17.37■□□□□ 0.37
SMARCD1Q96GM5 SPTSSB-204ENST00000617024 1292 ntBASIC17.37■□□□□ 0.37
SMARCD1Q96GM5 RAB34-224ENST00000636513 888 ntTSL 5 BASIC17.37■□□□□ 0.37
SMARCD1Q96GM5 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.37■□□□□ 0.37
SMARCD1Q96GM5 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SMARCD1Q96GM5 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC17.37■□□□□ 0.37
SMARCD1Q96GM5 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SMARCD1Q96GM5 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SMARCD1Q96GM5 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC17.37■□□□□ 0.37
SMARCD1Q96GM5 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SMARCD1Q96GM5 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC17.37■□□□□ 0.37
SMARCD1Q96GM5 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
SMARCD1Q96GM5 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SMARCD1Q96GM5 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SMARCD1Q96GM5 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
SMARCD1Q96GM5 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.37■□□□□ 0.37
SMARCD1Q96GM5 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SMARCD1Q96GM5 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
SMARCD1Q96GM5 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC17.36■□□□□ 0.37
SMARCD1Q96GM5 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
SMARCD1Q96GM5 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SMARCD1Q96GM5 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC17.36■□□□□ 0.37
SMARCD1Q96GM5 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SMARCD1Q96GM5 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SMARCD1Q96GM5 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
SMARCD1Q96GM5 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.36■□□□□ 0.37
SMARCD1Q96GM5 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SMARCD1Q96GM5 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SMARCD1Q96GM5 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
SMARCD1Q96GM5 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SMARCD1Q96GM5 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17.36■□□□□ 0.37
SMARCD1Q96GM5 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SMARCD1Q96GM5 HLA-H-201ENST00000383620 1096 ntBASIC17.36■□□□□ 0.37
SMARCD1Q96GM5 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SMARCD1Q96GM5 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC17.36■□□□□ 0.37
SMARCD1Q96GM5 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC17.36■□□□□ 0.37
SMARCD1Q96GM5 AC098859.1-201ENST00000502915 1238 ntBASIC17.36■□□□□ 0.37
SMARCD1Q96GM5 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC17.36■□□□□ 0.37
SMARCD1Q96GM5 FHL2-212ENST00000607522 759 ntTSL 2 BASIC17.36■□□□□ 0.37
SMARCD1Q96GM5 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SMARCD1Q96GM5 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SMARCD1Q96GM5 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SMARCD1Q96GM5 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SMARCD1Q96GM5 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC17.36■□□□□ 0.37
SMARCD1Q96GM5 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC17.36■□□□□ 0.37
SMARCD1Q96GM5 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC17.36■□□□□ 0.37
SMARCD1Q96GM5 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC17.36■□□□□ 0.37
SMARCD1Q96GM5 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SMARCD1Q96GM5 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC17.35■□□□□ 0.37
SMARCD1Q96GM5 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SMARCD1Q96GM5 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SMARCD1Q96GM5 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC17.35■□□□□ 0.37
SMARCD1Q96GM5 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC17.35■□□□□ 0.37
SMARCD1Q96GM5 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SMARCD1Q96GM5 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SMARCD1Q96GM5 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC17.35■□□□□ 0.37
SMARCD1Q96GM5 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SMARCD1Q96GM5 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC17.35■□□□□ 0.37
SMARCD1Q96GM5 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SMARCD1Q96GM5 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC17.35■□□□□ 0.37
SMARCD1Q96GM5 SPDYE7P-202ENST00000420373 878 ntBASIC17.35■□□□□ 0.37
SMARCD1Q96GM5 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC17.35■□□□□ 0.37
SMARCD1Q96GM5 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC17.35■□□□□ 0.37
SMARCD1Q96GM5 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC17.35■□□□□ 0.37
SMARCD1Q96GM5 CNN2P2-201ENST00000443536 909 ntBASIC17.35■□□□□ 0.37
SMARCD1Q96GM5 CNN2P3-201ENST00000450201 906 ntBASIC17.35■□□□□ 0.37
SMARCD1Q96GM5 SLBP-205ENST00000488267 987 ntTSL 2 BASIC17.35■□□□□ 0.37
SMARCD1Q96GM5 VPS29-207ENST00000549970 818 ntTSL 3 BASIC17.35■□□□□ 0.37
SMARCD1Q96GM5 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC17.35■□□□□ 0.37
SMARCD1Q96GM5 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
SMARCD1Q96GM5 AL136317.3-201ENST00000618497 906 ntBASIC17.35■□□□□ 0.37
SMARCD1Q96GM5 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC17.35■□□□□ 0.37
SMARCD1Q96GM5 Z92544.3-201ENST00000624747 417 ntBASIC17.35■□□□□ 0.37
SMARCD1Q96GM5 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
SMARCD1Q96GM5 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SMARCD1Q96GM5 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC17.35■□□□□ 0.37
SMARCD1Q96GM5 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
SMARCD1Q96GM5 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SMARCD1Q96GM5 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SMARCD1Q96GM5 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
SMARCD1Q96GM5 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SMARCD1Q96GM5 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SMARCD1Q96GM5 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SMARCD1Q96GM5 AC092171.3-201ENST00000610122 2651 ntBASIC17.34■□□□□ 0.37
SMARCD1Q96GM5 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SMARCD1Q96GM5 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
SMARCD1Q96GM5 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SMARCD1Q96GM5 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SMARCD1Q96GM5 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SMARCD1Q96GM5 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SMARCD1Q96GM5 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
SMARCD1Q96GM5 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SMARCD1Q96GM5 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms