Protein–RNA interactions for Protein: Q96EX1

SMIM12, Small integral membrane protein 12, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM12Q96EX1 AP002414.1-201ENST00000391405 1147 ntBASIC12.68□□□□□ -0.38
SMIM12Q96EX1 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SMIM12Q96EX1 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC12.68□□□□□ -0.38
SMIM12Q96EX1 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC12.68□□□□□ -0.38
SMIM12Q96EX1 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC12.68□□□□□ -0.38
SMIM12Q96EX1 NAPSB-206ENST00000562112 1266 ntBASIC12.68□□□□□ -0.38
SMIM12Q96EX1 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC12.68□□□□□ -0.38
SMIM12Q96EX1 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
SMIM12Q96EX1 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SMIM12Q96EX1 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC12.68□□□□□ -0.38
SMIM12Q96EX1 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC12.68□□□□□ -0.38
SMIM12Q96EX1 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SMIM12Q96EX1 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
SMIM12Q96EX1 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
SMIM12Q96EX1 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SMIM12Q96EX1 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SMIM12Q96EX1 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SMIM12Q96EX1 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SMIM12Q96EX1 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
SMIM12Q96EX1 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SMIM12Q96EX1 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
SMIM12Q96EX1 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SMIM12Q96EX1 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SMIM12Q96EX1 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SMIM12Q96EX1 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
SMIM12Q96EX1 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
SMIM12Q96EX1 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
SMIM12Q96EX1 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
SMIM12Q96EX1 AC010491.1-201ENST00000563101 2797 ntBASIC12.68□□□□□ -0.38
SMIM12Q96EX1 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
SMIM12Q96EX1 SUPT20HL2-201ENST00000486479 2409 ntBASIC12.68□□□□□ -0.38
SMIM12Q96EX1 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SMIM12Q96EX1 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
SMIM12Q96EX1 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SMIM12Q96EX1 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC12.68□□□□□ -0.38
SMIM12Q96EX1 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SMIM12Q96EX1 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SMIM12Q96EX1 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC12.68□□□□□ -0.38
SMIM12Q96EX1 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
SMIM12Q96EX1 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SMIM12Q96EX1 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SMIM12Q96EX1 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
SMIM12Q96EX1 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SMIM12Q96EX1 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
SMIM12Q96EX1 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC12.67□□□□□ -0.38
SMIM12Q96EX1 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SMIM12Q96EX1 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SMIM12Q96EX1 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
SMIM12Q96EX1 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC12.67□□□□□ -0.38
SMIM12Q96EX1 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SMIM12Q96EX1 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SMIM12Q96EX1 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
SMIM12Q96EX1 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC12.67□□□□□ -0.38
SMIM12Q96EX1 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC12.67□□□□□ -0.38
SMIM12Q96EX1 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SMIM12Q96EX1 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SMIM12Q96EX1 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
SMIM12Q96EX1 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SMIM12Q96EX1 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
SMIM12Q96EX1 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SMIM12Q96EX1 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SMIM12Q96EX1 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC12.67□□□□□ -0.38
SMIM12Q96EX1 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
SMIM12Q96EX1 AC023157.3-201ENST00000619086 2088 ntBASIC12.67□□□□□ -0.38
SMIM12Q96EX1 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SMIM12Q96EX1 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SMIM12Q96EX1 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC12.67□□□□□ -0.38
SMIM12Q96EX1 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SMIM12Q96EX1 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SMIM12Q96EX1 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC12.67□□□□□ -0.38
SMIM12Q96EX1 AC090192.1-201ENST00000517740 490 ntBASIC12.67□□□□□ -0.38
SMIM12Q96EX1 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SMIM12Q96EX1 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC12.67□□□□□ -0.38
SMIM12Q96EX1 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC12.67□□□□□ -0.38
SMIM12Q96EX1 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC12.67□□□□□ -0.38
SMIM12Q96EX1 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC12.67□□□□□ -0.38
SMIM12Q96EX1 Z99916.2-201ENST00000604037 246 ntBASIC12.67□□□□□ -0.38
SMIM12Q96EX1 SPEG-225ENST00000617028 815 ntTSL 5 BASIC12.67□□□□□ -0.38
SMIM12Q96EX1 ITM2C-210ENST00000620962 501 ntBASIC12.67□□□□□ -0.38
SMIM12Q96EX1 AC141257.4-201ENST00000634557 245 ntBASIC12.67□□□□□ -0.38
SMIM12Q96EX1 AC136944.6-201ENST00000634818 245 ntBASIC12.67□□□□□ -0.38
SMIM12Q96EX1 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC12.67□□□□□ -0.38
SMIM12Q96EX1 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SMIM12Q96EX1 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SMIM12Q96EX1 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SMIM12Q96EX1 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SMIM12Q96EX1 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
SMIM12Q96EX1 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC12.67□□□□□ -0.38
SMIM12Q96EX1 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
SMIM12Q96EX1 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
SMIM12Q96EX1 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SMIM12Q96EX1 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC12.67□□□□□ -0.38
SMIM12Q96EX1 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC12.67□□□□□ -0.38
SMIM12Q96EX1 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SMIM12Q96EX1 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SMIM12Q96EX1 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC12.67□□□□□ -0.38
SMIM12Q96EX1 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
SMIM12Q96EX1 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SMIM12Q96EX1 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC12.66□□□□□ -0.38
SMIM12Q96EX1 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms