Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC16.86■□□□□ 0.29
RTP4Q96DX8 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC16.86■□□□□ 0.29
RTP4Q96DX8 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC16.86■□□□□ 0.29
RTP4Q96DX8 CDC14C-201ENST00000428251 1719 ntBASIC16.86■□□□□ 0.29
RTP4Q96DX8 CICP6-201ENST00000457191 2729 ntBASIC16.86■□□□□ 0.29
RTP4Q96DX8 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RTP4Q96DX8 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RTP4Q96DX8 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC16.86■□□□□ 0.29
RTP4Q96DX8 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
RTP4Q96DX8 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RTP4Q96DX8 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
RTP4Q96DX8 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RTP4Q96DX8 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RTP4Q96DX8 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RTP4Q96DX8 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
RTP4Q96DX8 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RTP4Q96DX8 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.85■□□□□ 0.29
RTP4Q96DX8 AC112504.1-201ENST00000623415 1841 ntBASIC16.85■□□□□ 0.29
RTP4Q96DX8 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
RTP4Q96DX8 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
RTP4Q96DX8 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
RTP4Q96DX8 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RTP4Q96DX8 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
RTP4Q96DX8 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC16.85■□□□□ 0.29
RTP4Q96DX8 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC16.85■□□□□ 0.29
RTP4Q96DX8 AL591424.1-201ENST00000442569 1213 ntBASIC16.85■□□□□ 0.29
RTP4Q96DX8 AL513480.1-201ENST00000451731 511 ntBASIC16.85■□□□□ 0.29
RTP4Q96DX8 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
RTP4Q96DX8 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RTP4Q96DX8 THTPA-204ENST00000554970 569 ntTSL 4 BASIC16.85■□□□□ 0.29
RTP4Q96DX8 THTPA-206ENST00000556015 535 ntTSL 3 BASIC16.85■□□□□ 0.29
RTP4Q96DX8 AC096734.2-201ENST00000562054 433 ntBASIC16.85■□□□□ 0.29
RTP4Q96DX8 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RTP4Q96DX8 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC16.85■□□□□ 0.29
RTP4Q96DX8 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC16.85■□□□□ 0.29
RTP4Q96DX8 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RTP4Q96DX8 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
RTP4Q96DX8 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC16.85■□□□□ 0.29
RTP4Q96DX8 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RTP4Q96DX8 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RTP4Q96DX8 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RTP4Q96DX8 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC16.85■□□□□ 0.29
RTP4Q96DX8 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC16.85■□□□□ 0.29
RTP4Q96DX8 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC16.85■□□□□ 0.29
RTP4Q96DX8 AC010491.1-201ENST00000563101 2797 ntBASIC16.85■□□□□ 0.29
RTP4Q96DX8 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
RTP4Q96DX8 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.85■□□□□ 0.29
RTP4Q96DX8 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.85■□□□□ 0.29
RTP4Q96DX8 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RTP4Q96DX8 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RTP4Q96DX8 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RTP4Q96DX8 AC105917.1-201ENST00000506637 2539 ntBASIC16.85■□□□□ 0.29
RTP4Q96DX8 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RTP4Q96DX8 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
RTP4Q96DX8 AC069224.1-201ENST00000566372 1715 ntBASIC16.84■□□□□ 0.29
RTP4Q96DX8 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC16.84■□□□□ 0.29
RTP4Q96DX8 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RTP4Q96DX8 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC16.84■□□□□ 0.29
RTP4Q96DX8 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RTP4Q96DX8 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RTP4Q96DX8 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RTP4Q96DX8 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RTP4Q96DX8 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RTP4Q96DX8 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RTP4Q96DX8 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC16.84■□□□□ 0.29
RTP4Q96DX8 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RTP4Q96DX8 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RTP4Q96DX8 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC16.84■□□□□ 0.29
RTP4Q96DX8 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
RTP4Q96DX8 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RTP4Q96DX8 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RTP4Q96DX8 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RTP4Q96DX8 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC16.84■□□□□ 0.29
RTP4Q96DX8 AC010507.1-201ENST00000633895 436 ntBASIC16.84■□□□□ 0.29
RTP4Q96DX8 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
RTP4Q96DX8 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
RTP4Q96DX8 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC16.84■□□□□ 0.29
RTP4Q96DX8 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC16.84■□□□□ 0.29
RTP4Q96DX8 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC16.84■□□□□ 0.29
RTP4Q96DX8 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RTP4Q96DX8 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC16.84■□□□□ 0.29
RTP4Q96DX8 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
RTP4Q96DX8 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RTP4Q96DX8 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.84■□□□□ 0.29
RTP4Q96DX8 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RTP4Q96DX8 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC16.84■□□□□ 0.29
RTP4Q96DX8 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RTP4Q96DX8 LINC02447-202ENST00000501888 2146 ntBASIC16.84■□□□□ 0.29
RTP4Q96DX8 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
RTP4Q96DX8 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
RTP4Q96DX8 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
RTP4Q96DX8 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.29
RTP4Q96DX8 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
RTP4Q96DX8 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RTP4Q96DX8 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RTP4Q96DX8 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RTP4Q96DX8 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RTP4Q96DX8 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC16.83■□□□□ 0.28
RTP4Q96DX8 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
RTP4Q96DX8 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms