Protein–RNA interactions for Protein: Q969E2

SCAMP4, Secretory carrier-associated membrane protein 4, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4Q969E2 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
SCAMP4Q969E2 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
SCAMP4Q969E2 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
SCAMP4Q969E2 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC16.42■□□□□ 0.22
SCAMP4Q969E2 AP000842.3-202ENST00000569238 1080 ntBASIC16.42■□□□□ 0.22
SCAMP4Q969E2 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SCAMP4Q969E2 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC16.42■□□□□ 0.22
SCAMP4Q969E2 AC020765.3-201ENST00000613051 740 ntBASIC16.42■□□□□ 0.22
SCAMP4Q969E2 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
SCAMP4Q969E2 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC16.42■□□□□ 0.22
SCAMP4Q969E2 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SCAMP4Q969E2 ALOX12P2-203ENST00000570921 1945 ntBASIC16.42■□□□□ 0.22
SCAMP4Q969E2 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SCAMP4Q969E2 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SCAMP4Q969E2 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC16.42■□□□□ 0.22
SCAMP4Q969E2 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SCAMP4Q969E2 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
SCAMP4Q969E2 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SCAMP4Q969E2 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SCAMP4Q969E2 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC16.42■□□□□ 0.22
SCAMP4Q969E2 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
SCAMP4Q969E2 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC16.42■□□□□ 0.22
SCAMP4Q969E2 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
SCAMP4Q969E2 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SCAMP4Q969E2 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC16.42■□□□□ 0.22
SCAMP4Q969E2 PCGF3-213ENST00000620529 1899 ntBASIC16.42■□□□□ 0.22
SCAMP4Q969E2 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SCAMP4Q969E2 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
SCAMP4Q969E2 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
SCAMP4Q969E2 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.41■□□□□ 0.22
SCAMP4Q969E2 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SCAMP4Q969E2 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SCAMP4Q969E2 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
SCAMP4Q969E2 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
SCAMP4Q969E2 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SCAMP4Q969E2 OS9-205ENST00000413095 1660 ntTSL 2 BASIC16.41■□□□□ 0.22
SCAMP4Q969E2 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SCAMP4Q969E2 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC16.41■□□□□ 0.22
SCAMP4Q969E2 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SCAMP4Q969E2 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SCAMP4Q969E2 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SCAMP4Q969E2 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SCAMP4Q969E2 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC16.41■□□□□ 0.22
SCAMP4Q969E2 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC16.41■□□□□ 0.22
SCAMP4Q969E2 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SCAMP4Q969E2 CBR1-202ENST00000399191 838 ntTSL 3 BASIC16.41■□□□□ 0.22
SCAMP4Q969E2 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC16.41■□□□□ 0.22
SCAMP4Q969E2 KRT18P32-201ENST00000424695 1287 ntBASIC16.41■□□□□ 0.22
SCAMP4Q969E2 PRYP6-201ENST00000514804 343 ntBASIC16.41■□□□□ 0.22
SCAMP4Q969E2 SLC25A39P2-201ENST00000537614 270 ntBASIC16.41■□□□□ 0.22
SCAMP4Q969E2 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
SCAMP4Q969E2 TSFM-210ENST00000550559 897 ntTSL 5 BASIC16.41■□□□□ 0.22
SCAMP4Q969E2 KRT8P23-201ENST00000560090 1207 ntBASIC16.41■□□□□ 0.22
SCAMP4Q969E2 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC16.41■□□□□ 0.22
SCAMP4Q969E2 SSH2-211ENST00000590153 570 ntTSL 4 BASIC16.41■□□□□ 0.22
SCAMP4Q969E2 NKG7-205ENST00000600427 520 ntTSL 3 BASIC16.41■□□□□ 0.22
SCAMP4Q969E2 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC16.41■□□□□ 0.22
SCAMP4Q969E2 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC16.41■□□□□ 0.22
SCAMP4Q969E2 PCDHA14-201ENST00000506751 2298 ntBASIC16.41■□□□□ 0.22
SCAMP4Q969E2 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SCAMP4Q969E2 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SCAMP4Q969E2 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SCAMP4Q969E2 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC16.41■□□□□ 0.22
SCAMP4Q969E2 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SCAMP4Q969E2 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC16.41■□□□□ 0.22
SCAMP4Q969E2 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SCAMP4Q969E2 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC16.41■□□□□ 0.22
SCAMP4Q969E2 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
SCAMP4Q969E2 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SCAMP4Q969E2 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SCAMP4Q969E2 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
SCAMP4Q969E2 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC16.41■□□□□ 0.22
SCAMP4Q969E2 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC16.41■□□□□ 0.22
SCAMP4Q969E2 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC16.41■□□□□ 0.22
SCAMP4Q969E2 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SCAMP4Q969E2 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC16.41■□□□□ 0.22
SCAMP4Q969E2 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
SCAMP4Q969E2 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SCAMP4Q969E2 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SCAMP4Q969E2 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
SCAMP4Q969E2 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SCAMP4Q969E2 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SCAMP4Q969E2 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
SCAMP4Q969E2 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SCAMP4Q969E2 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC16.4■□□□□ 0.22
SCAMP4Q969E2 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC16.4■□□□□ 0.22
SCAMP4Q969E2 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
SCAMP4Q969E2 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SCAMP4Q969E2 MIR346-201ENST00000362234 95 ntBASIC16.4■□□□□ 0.22
SCAMP4Q969E2 PTMS-202ENST00000389462 773 ntTSL 2 BASIC16.4■□□□□ 0.22
SCAMP4Q969E2 TSEN15P1-201ENST00000423257 515 ntBASIC16.4■□□□□ 0.22
SCAMP4Q969E2 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC16.4■□□□□ 0.22
SCAMP4Q969E2 METTL21AP1-201ENST00000438852 635 ntBASIC16.4■□□□□ 0.22
SCAMP4Q969E2 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
SCAMP4Q969E2 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC16.4■□□□□ 0.22
SCAMP4Q969E2 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC16.4■□□□□ 0.22
SCAMP4Q969E2 AC009093.7-201ENST00000623853 1223 ntBASIC16.4■□□□□ 0.22
SCAMP4Q969E2 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
SCAMP4Q969E2 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC16.4■□□□□ 0.22
SCAMP4Q969E2 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms