Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RAPGEF4Q8WZA2 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC21.53■■□□□ 1.04
RAPGEF4Q8WZA2 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC21.53■■□□□ 1.04
RAPGEF4Q8WZA2 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RAPGEF4Q8WZA2 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RAPGEF4Q8WZA2 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
RAPGEF4Q8WZA2 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
RAPGEF4Q8WZA2 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RAPGEF4Q8WZA2 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RAPGEF4Q8WZA2 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC21.53■■□□□ 1.04
RAPGEF4Q8WZA2 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
RAPGEF4Q8WZA2 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RAPGEF4Q8WZA2 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RAPGEF4Q8WZA2 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RAPGEF4Q8WZA2 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC21.53■■□□□ 1.04
RAPGEF4Q8WZA2 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
RAPGEF4Q8WZA2 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC21.53■■□□□ 1.04
RAPGEF4Q8WZA2 PGF-202ENST00000405431 666 ntTSL 5 BASIC21.53■■□□□ 1.04
RAPGEF4Q8WZA2 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC21.53■■□□□ 1.04
RAPGEF4Q8WZA2 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
RAPGEF4Q8WZA2 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC21.53■■□□□ 1.04
RAPGEF4Q8WZA2 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC21.53■■□□□ 1.04
RAPGEF4Q8WZA2 AC004461.2-201ENST00000629517 803 ntBASIC21.53■■□□□ 1.04
RAPGEF4Q8WZA2 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RAPGEF4Q8WZA2 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
RAPGEF4Q8WZA2 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC21.53■■□□□ 1.04
RAPGEF4Q8WZA2 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RAPGEF4Q8WZA2 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RAPGEF4Q8WZA2 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
RAPGEF4Q8WZA2 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC21.52■■□□□ 1.04
RAPGEF4Q8WZA2 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
RAPGEF4Q8WZA2 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC21.52■■□□□ 1.04
RAPGEF4Q8WZA2 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
RAPGEF4Q8WZA2 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
RAPGEF4Q8WZA2 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC21.52■■□□□ 1.04
RAPGEF4Q8WZA2 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC21.52■■□□□ 1.04
RAPGEF4Q8WZA2 HLA-V-201ENST00000429037 534 ntBASIC21.52■■□□□ 1.04
RAPGEF4Q8WZA2 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC21.52■■□□□ 1.04
RAPGEF4Q8WZA2 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RAPGEF4Q8WZA2 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC21.52■■□□□ 1.04
RAPGEF4Q8WZA2 TPRX2P-201ENST00000535362 881 ntBASIC21.52■■□□□ 1.04
RAPGEF4Q8WZA2 MIR6069-201ENST00000620069 79 ntBASIC21.52■■□□□ 1.04
RAPGEF4Q8WZA2 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC21.52■■□□□ 1.04
RAPGEF4Q8WZA2 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RAPGEF4Q8WZA2 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RAPGEF4Q8WZA2 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC21.52■■□□□ 1.04
RAPGEF4Q8WZA2 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
RAPGEF4Q8WZA2 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC21.52■■□□□ 1.04
RAPGEF4Q8WZA2 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RAPGEF4Q8WZA2 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RAPGEF4Q8WZA2 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC21.52■■□□□ 1.04
RAPGEF4Q8WZA2 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
RAPGEF4Q8WZA2 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC21.52■■□□□ 1.03
RAPGEF4Q8WZA2 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC21.52■■□□□ 1.03
RAPGEF4Q8WZA2 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
RAPGEF4Q8WZA2 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC21.52■■□□□ 1.03
RAPGEF4Q8WZA2 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RAPGEF4Q8WZA2 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RAPGEF4Q8WZA2 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
RAPGEF4Q8WZA2 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC21.51■■□□□ 1.03
RAPGEF4Q8WZA2 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
RAPGEF4Q8WZA2 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
RAPGEF4Q8WZA2 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC21.51■■□□□ 1.03
RAPGEF4Q8WZA2 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RAPGEF4Q8WZA2 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC21.51■■□□□ 1.03
RAPGEF4Q8WZA2 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC21.51■■□□□ 1.03
RAPGEF4Q8WZA2 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
RAPGEF4Q8WZA2 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RAPGEF4Q8WZA2 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC21.51■■□□□ 1.03
RAPGEF4Q8WZA2 AL139010.1-201ENST00000454878 894 ntBASIC21.51■■□□□ 1.03
RAPGEF4Q8WZA2 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC21.51■■□□□ 1.03
RAPGEF4Q8WZA2 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC21.51■■□□□ 1.03
RAPGEF4Q8WZA2 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC21.51■■□□□ 1.03
RAPGEF4Q8WZA2 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC21.51■■□□□ 1.03
RAPGEF4Q8WZA2 5S_rRNA.22-201ENST00000614916 106 ntBASIC21.51■■□□□ 1.03
RAPGEF4Q8WZA2 AL109936.8-201ENST00000641772 604 ntBASIC21.51■■□□□ 1.03
RAPGEF4Q8WZA2 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC21.51■■□□□ 1.03
RAPGEF4Q8WZA2 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
RAPGEF4Q8WZA2 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
RAPGEF4Q8WZA2 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC21.51■■□□□ 1.03
RAPGEF4Q8WZA2 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RAPGEF4Q8WZA2 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RAPGEF4Q8WZA2 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC21.51■■□□□ 1.03
RAPGEF4Q8WZA2 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
RAPGEF4Q8WZA2 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
RAPGEF4Q8WZA2 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
RAPGEF4Q8WZA2 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RAPGEF4Q8WZA2 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC21.5■■□□□ 1.03
RAPGEF4Q8WZA2 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RAPGEF4Q8WZA2 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
RAPGEF4Q8WZA2 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RAPGEF4Q8WZA2 GGT4P-201ENST00000623672 1708 ntBASIC21.5■■□□□ 1.03
RAPGEF4Q8WZA2 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RAPGEF4Q8WZA2 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC21.5■■□□□ 1.03
RAPGEF4Q8WZA2 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
RAPGEF4Q8WZA2 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC21.5■■□□□ 1.03
RAPGEF4Q8WZA2 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
RAPGEF4Q8WZA2 MEP1AP4-201ENST00000423244 1087 ntBASIC21.5■■□□□ 1.03
RAPGEF4Q8WZA2 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RAPGEF4Q8WZA2 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC21.5■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms