Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
RTN4IP1Q8WWV3 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC14.02□□□□□ -0.17
RTN4IP1Q8WWV3 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.17
RTN4IP1Q8WWV3 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RTN4IP1Q8WWV3 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RTN4IP1Q8WWV3 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC14.02□□□□□ -0.17
RTN4IP1Q8WWV3 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC14.02□□□□□ -0.17
RTN4IP1Q8WWV3 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC14.02□□□□□ -0.17
RTN4IP1Q8WWV3 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
RTN4IP1Q8WWV3 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
RTN4IP1Q8WWV3 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC14.02□□□□□ -0.17
RTN4IP1Q8WWV3 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
RTN4IP1Q8WWV3 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RTN4IP1Q8WWV3 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RTN4IP1Q8WWV3 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RTN4IP1Q8WWV3 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RTN4IP1Q8WWV3 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC14.01□□□□□ -0.17
RTN4IP1Q8WWV3 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
RTN4IP1Q8WWV3 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
RTN4IP1Q8WWV3 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
RTN4IP1Q8WWV3 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RTN4IP1Q8WWV3 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
RTN4IP1Q8WWV3 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
RTN4IP1Q8WWV3 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RTN4IP1Q8WWV3 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
RTN4IP1Q8WWV3 ING5-213ENST00000636051 4199 ntTSL 5 BASIC14.01□□□□□ -0.17
RTN4IP1Q8WWV3 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC14.01□□□□□ -0.17
RTN4IP1Q8WWV3 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RTN4IP1Q8WWV3 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
RTN4IP1Q8WWV3 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RTN4IP1Q8WWV3 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
RTN4IP1Q8WWV3 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
RTN4IP1Q8WWV3 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RTN4IP1Q8WWV3 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
RTN4IP1Q8WWV3 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
RTN4IP1Q8WWV3 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
RTN4IP1Q8WWV3 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RTN4IP1Q8WWV3 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC14.01□□□□□ -0.17
RTN4IP1Q8WWV3 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
RTN4IP1Q8WWV3 ACTG1P4-201ENST00000425123 1122 ntBASIC14.01□□□□□ -0.17
RTN4IP1Q8WWV3 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC14.01□□□□□ -0.17
RTN4IP1Q8WWV3 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC14.01□□□□□ -0.17
RTN4IP1Q8WWV3 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
RTN4IP1Q8WWV3 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC14.01□□□□□ -0.17
RTN4IP1Q8WWV3 MTDHP3-201ENST00000594186 672 ntBASIC14.01□□□□□ -0.17
RTN4IP1Q8WWV3 AC008608.2-201ENST00000606089 416 ntBASIC14.01□□□□□ -0.17
RTN4IP1Q8WWV3 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
RTN4IP1Q8WWV3 AL355877.3-201ENST00000622820 899 ntBASIC14.01□□□□□ -0.17
RTN4IP1Q8WWV3 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
RTN4IP1Q8WWV3 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC14.01□□□□□ -0.17
RTN4IP1Q8WWV3 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
RTN4IP1Q8WWV3 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
RTN4IP1Q8WWV3 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RTN4IP1Q8WWV3 AL356309.3-201ENST00000624132 1934 ntBASIC14.01□□□□□ -0.17
RTN4IP1Q8WWV3 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
RTN4IP1Q8WWV3 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
RTN4IP1Q8WWV3 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC14.01□□□□□ -0.17
RTN4IP1Q8WWV3 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RTN4IP1Q8WWV3 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RTN4IP1Q8WWV3 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RTN4IP1Q8WWV3 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC14□□□□□ -0.17
RTN4IP1Q8WWV3 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC14□□□□□ -0.17
RTN4IP1Q8WWV3 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RTN4IP1Q8WWV3 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RTN4IP1Q8WWV3 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RTN4IP1Q8WWV3 AC097637.2-201ENST00000624096 1997 ntBASIC14□□□□□ -0.17
RTN4IP1Q8WWV3 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RTN4IP1Q8WWV3 AL513477.1-201ENST00000602865 2407 ntBASIC14□□□□□ -0.17
RTN4IP1Q8WWV3 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC14□□□□□ -0.17
RTN4IP1Q8WWV3 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC14□□□□□ -0.17
RTN4IP1Q8WWV3 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC14□□□□□ -0.17
RTN4IP1Q8WWV3 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC14□□□□□ -0.17
RTN4IP1Q8WWV3 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC14□□□□□ -0.17
RTN4IP1Q8WWV3 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC14□□□□□ -0.17
RTN4IP1Q8WWV3 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
RTN4IP1Q8WWV3 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
RTN4IP1Q8WWV3 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC14□□□□□ -0.17
RTN4IP1Q8WWV3 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
RTN4IP1Q8WWV3 PRYP5-201ENST00000451909 266 ntBASIC14□□□□□ -0.17
RTN4IP1Q8WWV3 SAPCD2P3-201ENST00000455031 850 ntBASIC14□□□□□ -0.17
RTN4IP1Q8WWV3 BX005266.1-201ENST00000473402 457 ntBASIC14□□□□□ -0.17
RTN4IP1Q8WWV3 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
RTN4IP1Q8WWV3 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC14□□□□□ -0.17
RTN4IP1Q8WWV3 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC14□□□□□ -0.17
RTN4IP1Q8WWV3 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC14□□□□□ -0.17
RTN4IP1Q8WWV3 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC14□□□□□ -0.17
RTN4IP1Q8WWV3 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC14□□□□□ -0.17
RTN4IP1Q8WWV3 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
RTN4IP1Q8WWV3 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC14□□□□□ -0.17
RTN4IP1Q8WWV3 ANKRD26P3-201ENST00000454044 2748 ntBASIC14□□□□□ -0.17
RTN4IP1Q8WWV3 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC14□□□□□ -0.17
RTN4IP1Q8WWV3 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
RTN4IP1Q8WWV3 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC14□□□□□ -0.17
RTN4IP1Q8WWV3 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
RTN4IP1Q8WWV3 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC14□□□□□ -0.17
RTN4IP1Q8WWV3 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
RTN4IP1Q8WWV3 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC14□□□□□ -0.17
RTN4IP1Q8WWV3 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC14□□□□□ -0.17
RTN4IP1Q8WWV3 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
RTN4IP1Q8WWV3 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 70.6 ms