Protein–RNA interactions for Protein: Q8WWL7

CCNB3, G2/mitotic-specific cyclin-B3, humanhuman

Predictions only

Length 1,395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB3Q8WWL7 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
CCNB3Q8WWL7 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC25.25■■□□□ 1.63
CCNB3Q8WWL7 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC25.25■■□□□ 1.63
CCNB3Q8WWL7 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC25.25■■□□□ 1.63
CCNB3Q8WWL7 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC25.25■■□□□ 1.63
CCNB3Q8WWL7 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
CCNB3Q8WWL7 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
CCNB3Q8WWL7 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
CCNB3Q8WWL7 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
CCNB3Q8WWL7 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC25.24■■□□□ 1.63
CCNB3Q8WWL7 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC25.24■■□□□ 1.63
CCNB3Q8WWL7 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC25.24■■□□□ 1.63
CCNB3Q8WWL7 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC25.24■■□□□ 1.63
CCNB3Q8WWL7 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC25.24■■□□□ 1.63
CCNB3Q8WWL7 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC25.24■■□□□ 1.63
CCNB3Q8WWL7 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
CCNB3Q8WWL7 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
CCNB3Q8WWL7 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
CCNB3Q8WWL7 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
CCNB3Q8WWL7 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
CCNB3Q8WWL7 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC25.24■■□□□ 1.63
CCNB3Q8WWL7 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC25.24■■□□□ 1.63
CCNB3Q8WWL7 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC25.24■■□□□ 1.63
CCNB3Q8WWL7 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC25.24■■□□□ 1.63
CCNB3Q8WWL7 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC25.24■■□□□ 1.63
CCNB3Q8WWL7 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC25.24■■□□□ 1.63
CCNB3Q8WWL7 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
CCNB3Q8WWL7 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC25.24■■□□□ 1.63
CCNB3Q8WWL7 AC140912.1-201ENST00000577171 1054 ntBASIC25.24■■□□□ 1.63
CCNB3Q8WWL7 UBALD1-205ENST00000590891 2641 ntBASIC25.24■■□□□ 1.63
CCNB3Q8WWL7 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
CCNB3Q8WWL7 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC25.24■■□□□ 1.63
CCNB3Q8WWL7 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
CCNB3Q8WWL7 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
CCNB3Q8WWL7 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
CCNB3Q8WWL7 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
CCNB3Q8WWL7 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
CCNB3Q8WWL7 RPS19-201ENST00000221975 500 ntTSL 3 BASIC25.23■■□□□ 1.63
CCNB3Q8WWL7 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC25.23■■□□□ 1.63
CCNB3Q8WWL7 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC25.23■■□□□ 1.63
CCNB3Q8WWL7 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC25.23■■□□□ 1.63
CCNB3Q8WWL7 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC25.23■■□□□ 1.63
CCNB3Q8WWL7 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC25.23■■□□□ 1.63
CCNB3Q8WWL7 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC25.23■■□□□ 1.63
CCNB3Q8WWL7 AC104794.3-201ENST00000566840 1248 ntBASIC25.23■■□□□ 1.63
CCNB3Q8WWL7 TP53TG3HP-202ENST00000569755 579 ntBASIC25.23■■□□□ 1.63
CCNB3Q8WWL7 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC25.23■■□□□ 1.63
CCNB3Q8WWL7 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC25.23■■□□□ 1.63
CCNB3Q8WWL7 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC25.23■■□□□ 1.63
CCNB3Q8WWL7 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC25.23■■□□□ 1.63
CCNB3Q8WWL7 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
CCNB3Q8WWL7 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
CCNB3Q8WWL7 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
CCNB3Q8WWL7 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC25.23■■□□□ 1.63
CCNB3Q8WWL7 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
CCNB3Q8WWL7 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
CCNB3Q8WWL7 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC25.23■■□□□ 1.63
CCNB3Q8WWL7 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC25.23■■□□□ 1.63
CCNB3Q8WWL7 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
CCNB3Q8WWL7 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC25.22■■□□□ 1.63
CCNB3Q8WWL7 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC25.22■■□□□ 1.63
CCNB3Q8WWL7 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC25.22■■□□□ 1.63
CCNB3Q8WWL7 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
CCNB3Q8WWL7 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
CCNB3Q8WWL7 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
CCNB3Q8WWL7 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
CCNB3Q8WWL7 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
CCNB3Q8WWL7 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
CCNB3Q8WWL7 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
CCNB3Q8WWL7 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
CCNB3Q8WWL7 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC25.22■■□□□ 1.63
CCNB3Q8WWL7 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC25.22■■□□□ 1.63
CCNB3Q8WWL7 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC25.22■■□□□ 1.63
CCNB3Q8WWL7 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC25.22■■□□□ 1.63
CCNB3Q8WWL7 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
CCNB3Q8WWL7 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
CCNB3Q8WWL7 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC25.22■■□□□ 1.63
CCNB3Q8WWL7 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
CCNB3Q8WWL7 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC25.22■■□□□ 1.63
CCNB3Q8WWL7 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC25.22■■□□□ 1.63
CCNB3Q8WWL7 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC25.22■■□□□ 1.63
CCNB3Q8WWL7 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC25.22■■□□□ 1.63
CCNB3Q8WWL7 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
CCNB3Q8WWL7 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
CCNB3Q8WWL7 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC25.22■■□□□ 1.63
CCNB3Q8WWL7 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC25.22■■□□□ 1.63
CCNB3Q8WWL7 AC092171.3-201ENST00000610122 2651 ntBASIC25.21■■□□□ 1.63
CCNB3Q8WWL7 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC25.21■■□□□ 1.63
CCNB3Q8WWL7 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
CCNB3Q8WWL7 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC25.21■■□□□ 1.63
CCNB3Q8WWL7 CU639417.3-201ENST00000624240 1404 ntBASIC25.21■■□□□ 1.63
CCNB3Q8WWL7 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
CCNB3Q8WWL7 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
CCNB3Q8WWL7 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC25.21■■□□□ 1.63
CCNB3Q8WWL7 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
CCNB3Q8WWL7 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC25.21■■□□□ 1.63
CCNB3Q8WWL7 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
CCNB3Q8WWL7 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC25.21■■□□□ 1.63
CCNB3Q8WWL7 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC25.21■■□□□ 1.63
CCNB3Q8WWL7 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC25.21■■□□□ 1.63
Retrieved 100 of 98,524 protein–RNA pairs in 59.5 ms