Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SMIM4Q8WVI0 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SMIM4Q8WVI0 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SMIM4Q8WVI0 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SMIM4Q8WVI0 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SMIM4Q8WVI0 AC067930.6-201ENST00000623257 4947 ntBASIC14.19□□□□□ -0.14
SMIM4Q8WVI0 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
SMIM4Q8WVI0 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC14.19□□□□□ -0.14
SMIM4Q8WVI0 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
SMIM4Q8WVI0 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SMIM4Q8WVI0 AC092919.2-201ENST00000623631 1645 ntBASIC14.19□□□□□ -0.14
SMIM4Q8WVI0 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SMIM4Q8WVI0 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SMIM4Q8WVI0 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SMIM4Q8WVI0 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC14.19□□□□□ -0.14
SMIM4Q8WVI0 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
SMIM4Q8WVI0 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SMIM4Q8WVI0 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC14.19□□□□□ -0.14
SMIM4Q8WVI0 CICP24-201ENST00000605464 2705 ntBASIC14.19□□□□□ -0.14
SMIM4Q8WVI0 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
SMIM4Q8WVI0 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC14.19□□□□□ -0.14
SMIM4Q8WVI0 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SMIM4Q8WVI0 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SMIM4Q8WVI0 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SMIM4Q8WVI0 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
SMIM4Q8WVI0 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SMIM4Q8WVI0 PRORSD1P-201ENST00000295112 541 ntBASIC14.19□□□□□ -0.14
SMIM4Q8WVI0 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SMIM4Q8WVI0 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SMIM4Q8WVI0 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SMIM4Q8WVI0 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
SMIM4Q8WVI0 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC14.19□□□□□ -0.14
SMIM4Q8WVI0 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SMIM4Q8WVI0 AL158047.1-201ENST00000445918 881 ntBASIC14.19□□□□□ -0.14
SMIM4Q8WVI0 MEG3-211ENST00000452514 461 ntTSL 3 BASIC14.19□□□□□ -0.14
SMIM4Q8WVI0 AL359075.1-203ENST00000462729 1002 ntBASIC14.19□□□□□ -0.14
SMIM4Q8WVI0 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC14.19□□□□□ -0.14
SMIM4Q8WVI0 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC14.19□□□□□ -0.14
SMIM4Q8WVI0 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC14.19□□□□□ -0.14
SMIM4Q8WVI0 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC14.19□□□□□ -0.14
SMIM4Q8WVI0 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SMIM4Q8WVI0 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SMIM4Q8WVI0 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SMIM4Q8WVI0 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC14.19□□□□□ -0.14
SMIM4Q8WVI0 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC14.19□□□□□ -0.14
SMIM4Q8WVI0 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SMIM4Q8WVI0 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SMIM4Q8WVI0 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC14.19□□□□□ -0.14
SMIM4Q8WVI0 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SMIM4Q8WVI0 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
SMIM4Q8WVI0 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SMIM4Q8WVI0 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SMIM4Q8WVI0 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SMIM4Q8WVI0 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC14.19□□□□□ -0.14
SMIM4Q8WVI0 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
SMIM4Q8WVI0 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC14.19□□□□□ -0.14
SMIM4Q8WVI0 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SMIM4Q8WVI0 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SMIM4Q8WVI0 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
SMIM4Q8WVI0 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
SMIM4Q8WVI0 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SMIM4Q8WVI0 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC14.18□□□□□ -0.14
SMIM4Q8WVI0 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC14.18□□□□□ -0.14
SMIM4Q8WVI0 CICP13-201ENST00000422015 2789 ntBASIC14.18□□□□□ -0.14
SMIM4Q8WVI0 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC14.18□□□□□ -0.14
SMIM4Q8WVI0 AC007292.2-201ENST00000593524 1812 ntBASIC14.18□□□□□ -0.14
SMIM4Q8WVI0 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SMIM4Q8WVI0 KRT8P39-201ENST00000396270 1433 ntBASIC14.18□□□□□ -0.14
SMIM4Q8WVI0 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SMIM4Q8WVI0 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
SMIM4Q8WVI0 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SMIM4Q8WVI0 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SMIM4Q8WVI0 HBZP1-201ENST00000354915 429 ntBASIC14.18□□□□□ -0.14
SMIM4Q8WVI0 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC14.18□□□□□ -0.14
SMIM4Q8WVI0 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SMIM4Q8WVI0 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC14.18□□□□□ -0.14
SMIM4Q8WVI0 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC14.18□□□□□ -0.14
SMIM4Q8WVI0 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC14.18□□□□□ -0.14
SMIM4Q8WVI0 GCSHP5-201ENST00000443090 522 ntBASIC14.18□□□□□ -0.14
SMIM4Q8WVI0 FAM201B-201ENST00000458407 597 ntBASIC14.18□□□□□ -0.14
SMIM4Q8WVI0 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC14.18□□□□□ -0.14
SMIM4Q8WVI0 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC14.18□□□□□ -0.14
SMIM4Q8WVI0 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
SMIM4Q8WVI0 ABBA01031661.1-201ENST00000634362 1253 ntBASIC14.18□□□□□ -0.14
SMIM4Q8WVI0 CLN6-221ENST00000637494 765 ntTSL 5 BASIC14.18□□□□□ -0.14
SMIM4Q8WVI0 AL031432.5-201ENST00000641059 760 ntBASIC14.18□□□□□ -0.14
SMIM4Q8WVI0 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SMIM4Q8WVI0 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
SMIM4Q8WVI0 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC14.18□□□□□ -0.14
SMIM4Q8WVI0 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC14.18□□□□□ -0.14
SMIM4Q8WVI0 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
SMIM4Q8WVI0 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SMIM4Q8WVI0 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
SMIM4Q8WVI0 AC023908.3-201ENST00000564211 3047 ntBASIC14.18□□□□□ -0.14
SMIM4Q8WVI0 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SMIM4Q8WVI0 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
SMIM4Q8WVI0 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SMIM4Q8WVI0 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SMIM4Q8WVI0 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC14.18□□□□□ -0.14
SMIM4Q8WVI0 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms