Protein–RNA interactions for Protein: Q8NFH5

NUP35, Nucleoporin NUP53, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35Q8NFH5 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
NUP35Q8NFH5 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
NUP35Q8NFH5 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC12.43□□□□□ -0.42
NUP35Q8NFH5 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
NUP35Q8NFH5 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
NUP35Q8NFH5 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
NUP35Q8NFH5 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
NUP35Q8NFH5 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
NUP35Q8NFH5 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
NUP35Q8NFH5 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
NUP35Q8NFH5 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
NUP35Q8NFH5 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
NUP35Q8NFH5 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
NUP35Q8NFH5 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
NUP35Q8NFH5 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
NUP35Q8NFH5 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
NUP35Q8NFH5 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
NUP35Q8NFH5 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC12.43□□□□□ -0.42
NUP35Q8NFH5 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC12.43□□□□□ -0.42
NUP35Q8NFH5 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
NUP35Q8NFH5 AC128688.1-201ENST00000487626 519 ntBASIC12.43□□□□□ -0.42
NUP35Q8NFH5 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC12.43□□□□□ -0.42
NUP35Q8NFH5 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC12.43□□□□□ -0.42
NUP35Q8NFH5 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC12.43□□□□□ -0.42
NUP35Q8NFH5 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC12.43□□□□□ -0.42
NUP35Q8NFH5 EGLN1P1-201ENST00000531623 762 ntBASIC12.43□□□□□ -0.42
NUP35Q8NFH5 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
NUP35Q8NFH5 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC12.43□□□□□ -0.42
NUP35Q8NFH5 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC12.43□□□□□ -0.42
NUP35Q8NFH5 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC12.43□□□□□ -0.42
NUP35Q8NFH5 AP000525.1-201ENST00000608286 694 ntBASIC12.43□□□□□ -0.42
NUP35Q8NFH5 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
NUP35Q8NFH5 AL049637.2-201ENST00000641778 930 ntBASIC12.43□□□□□ -0.42
NUP35Q8NFH5 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC12.43□□□□□ -0.42
NUP35Q8NFH5 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
NUP35Q8NFH5 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
NUP35Q8NFH5 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
NUP35Q8NFH5 KRT8P49-201ENST00000604166 1432 ntBASIC12.43□□□□□ -0.42
NUP35Q8NFH5 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
NUP35Q8NFH5 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC12.43□□□□□ -0.42
NUP35Q8NFH5 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
NUP35Q8NFH5 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
NUP35Q8NFH5 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
NUP35Q8NFH5 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
NUP35Q8NFH5 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
NUP35Q8NFH5 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
NUP35Q8NFH5 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
NUP35Q8NFH5 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
NUP35Q8NFH5 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
NUP35Q8NFH5 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
NUP35Q8NFH5 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
NUP35Q8NFH5 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC12.42□□□□□ -0.42
NUP35Q8NFH5 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
NUP35Q8NFH5 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
NUP35Q8NFH5 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
NUP35Q8NFH5 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
NUP35Q8NFH5 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC12.42□□□□□ -0.42
NUP35Q8NFH5 AL353593.2-201ENST00000602529 1483 ntBASIC12.42□□□□□ -0.42
NUP35Q8NFH5 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
NUP35Q8NFH5 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC12.42□□□□□ -0.42
NUP35Q8NFH5 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
NUP35Q8NFH5 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
NUP35Q8NFH5 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
NUP35Q8NFH5 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
NUP35Q8NFH5 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
NUP35Q8NFH5 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
NUP35Q8NFH5 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
NUP35Q8NFH5 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC12.42□□□□□ -0.42
NUP35Q8NFH5 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
NUP35Q8NFH5 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
NUP35Q8NFH5 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
NUP35Q8NFH5 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
NUP35Q8NFH5 CD81-212ENST00000526072 1172 ntTSL 5 BASIC12.42□□□□□ -0.42
NUP35Q8NFH5 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC12.42□□□□□ -0.42
NUP35Q8NFH5 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC12.42□□□□□ -0.42
NUP35Q8NFH5 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
NUP35Q8NFH5 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC12.42□□□□□ -0.42
NUP35Q8NFH5 LITAF-220ENST00000620789 692 ntTSL 5 BASIC12.42□□□□□ -0.42
NUP35Q8NFH5 OR2I1P-210ENST00000642037 4691 ntBASIC12.42□□□□□ -0.42
NUP35Q8NFH5 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC12.42□□□□□ -0.42
NUP35Q8NFH5 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
NUP35Q8NFH5 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC12.42□□□□□ -0.42
NUP35Q8NFH5 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
NUP35Q8NFH5 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC12.42□□□□□ -0.42
NUP35Q8NFH5 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
NUP35Q8NFH5 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC12.42□□□□□ -0.42
NUP35Q8NFH5 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
NUP35Q8NFH5 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
NUP35Q8NFH5 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC12.42□□□□□ -0.42
NUP35Q8NFH5 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC12.42□□□□□ -0.42
NUP35Q8NFH5 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
NUP35Q8NFH5 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
NUP35Q8NFH5 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
NUP35Q8NFH5 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
NUP35Q8NFH5 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
NUP35Q8NFH5 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
NUP35Q8NFH5 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
NUP35Q8NFH5 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
NUP35Q8NFH5 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
NUP35Q8NFH5 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC12.41□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms