Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 BAD-202ENST00000394531 631 ntTSL 3 BASIC17.98■□□□□ 0.47
VPS52Q8N1B4 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC17.98■□□□□ 0.47
VPS52Q8N1B4 WRB-204ENST00000398753 699 ntTSL 3 BASIC17.98■□□□□ 0.47
VPS52Q8N1B4 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC17.98■□□□□ 0.47
VPS52Q8N1B4 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC17.98■□□□□ 0.47
VPS52Q8N1B4 SPDYE14P-201ENST00000442619 822 ntBASIC17.98■□□□□ 0.47
VPS52Q8N1B4 TAF8-206ENST00000472818 719 ntTSL 2 BASIC17.98■□□□□ 0.47
VPS52Q8N1B4 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC17.98■□□□□ 0.47
VPS52Q8N1B4 MTRF1LP2-201ENST00000506027 1122 ntBASIC17.98■□□□□ 0.47
VPS52Q8N1B4 BAD-207ENST00000544785 525 ntTSL 3 BASIC17.98■□□□□ 0.47
VPS52Q8N1B4 AC190387.1-201ENST00000551683 408 ntBASIC17.98■□□□□ 0.47
VPS52Q8N1B4 NAA60-208ENST00000570819 833 ntTSL 2 BASIC17.98■□□□□ 0.47
VPS52Q8N1B4 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC17.98■□□□□ 0.47
VPS52Q8N1B4 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
VPS52Q8N1B4 WT1-AS_2.1-201ENST00000613208 137 ntBASIC17.98■□□□□ 0.47
VPS52Q8N1B4 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
VPS52Q8N1B4 AC084121.4-201ENST00000641598 221 ntBASIC17.98■□□□□ 0.47
VPS52Q8N1B4 AF228730.8-201ENST00000642140 221 ntBASIC17.98■□□□□ 0.47
VPS52Q8N1B4 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC17.98■□□□□ 0.47
VPS52Q8N1B4 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
VPS52Q8N1B4 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
VPS52Q8N1B4 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
VPS52Q8N1B4 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
VPS52Q8N1B4 AC022211.2-201ENST00000585075 2527 ntBASIC17.98■□□□□ 0.47
VPS52Q8N1B4 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.98■□□□□ 0.47
VPS52Q8N1B4 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC17.98■□□□□ 0.47
VPS52Q8N1B4 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
VPS52Q8N1B4 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC17.97■□□□□ 0.47
VPS52Q8N1B4 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
VPS52Q8N1B4 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17.97■□□□□ 0.47
VPS52Q8N1B4 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
VPS52Q8N1B4 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
VPS52Q8N1B4 FO538757.1-201ENST00000623083 1397 ntBASIC17.97■□□□□ 0.47
VPS52Q8N1B4 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
VPS52Q8N1B4 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC17.97■□□□□ 0.47
VPS52Q8N1B4 VMA21-202ENST00000370361 693 ntTSL 5 BASIC17.97■□□□□ 0.47
VPS52Q8N1B4 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
VPS52Q8N1B4 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC17.97■□□□□ 0.47
VPS52Q8N1B4 SPDYE7P-202ENST00000420373 878 ntBASIC17.97■□□□□ 0.47
VPS52Q8N1B4 HNRNPA1P40-201ENST00000426371 1278 ntBASIC17.97■□□□□ 0.47
VPS52Q8N1B4 PNKD-204ENST00000436005 978 ntTSL 5 BASIC17.97■□□□□ 0.47
VPS52Q8N1B4 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC17.97■□□□□ 0.47
VPS52Q8N1B4 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
VPS52Q8N1B4 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC17.97■□□□□ 0.47
VPS52Q8N1B4 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
VPS52Q8N1B4 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC17.97■□□□□ 0.47
VPS52Q8N1B4 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
VPS52Q8N1B4 SLC25A39P2-201ENST00000537614 270 ntBASIC17.97■□□□□ 0.47
VPS52Q8N1B4 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC17.97■□□□□ 0.47
VPS52Q8N1B4 AC140878.1-201ENST00000565277 250 ntBASIC17.97■□□□□ 0.47
VPS52Q8N1B4 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
VPS52Q8N1B4 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC17.97■□□□□ 0.47
VPS52Q8N1B4 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
VPS52Q8N1B4 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
VPS52Q8N1B4 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
VPS52Q8N1B4 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
VPS52Q8N1B4 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC17.97■□□□□ 0.47
VPS52Q8N1B4 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
VPS52Q8N1B4 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
VPS52Q8N1B4 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
VPS52Q8N1B4 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
VPS52Q8N1B4 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
VPS52Q8N1B4 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
VPS52Q8N1B4 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC17.97■□□□□ 0.47
VPS52Q8N1B4 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
VPS52Q8N1B4 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
VPS52Q8N1B4 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
VPS52Q8N1B4 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
VPS52Q8N1B4 SLC22A20-204ENST00000530038 1673 ntBASIC17.96■□□□□ 0.47
VPS52Q8N1B4 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
VPS52Q8N1B4 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
VPS52Q8N1B4 EGFEM1P-202ENST00000431685 1563 ntBASIC17.96■□□□□ 0.47
VPS52Q8N1B4 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
VPS52Q8N1B4 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
VPS52Q8N1B4 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
VPS52Q8N1B4 TOP3BP1-201ENST00000420768 1380 ntBASIC17.96■□□□□ 0.47
VPS52Q8N1B4 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
VPS52Q8N1B4 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
VPS52Q8N1B4 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
VPS52Q8N1B4 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
VPS52Q8N1B4 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC17.96■□□□□ 0.47
VPS52Q8N1B4 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.96■□□□□ 0.47
VPS52Q8N1B4 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
VPS52Q8N1B4 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC17.96■□□□□ 0.47
VPS52Q8N1B4 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
VPS52Q8N1B4 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
VPS52Q8N1B4 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
VPS52Q8N1B4 RNU1-129P-201ENST00000384064 167 ntBASIC17.96■□□□□ 0.47
VPS52Q8N1B4 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC17.96■□□□□ 0.47
VPS52Q8N1B4 TREML5P-201ENST00000421694 576 ntBASIC17.96■□□□□ 0.47
VPS52Q8N1B4 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC17.96■□□□□ 0.47
VPS52Q8N1B4 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.47
VPS52Q8N1B4 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC17.96■□□□□ 0.47
VPS52Q8N1B4 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
VPS52Q8N1B4 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
VPS52Q8N1B4 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC17.96■□□□□ 0.47
VPS52Q8N1B4 U1.21-201ENST00000580816 167 ntBASIC17.96■□□□□ 0.47
VPS52Q8N1B4 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
VPS52Q8N1B4 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC17.96■□□□□ 0.47
VPS52Q8N1B4 AL031055.1-201ENST00000606362 631 ntBASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms