Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
CCDC116Q8IYX3 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC116Q8IYX3 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC15.65■□□□□ 0.1
CCDC116Q8IYX3 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC116Q8IYX3 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
CCDC116Q8IYX3 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC15.65■□□□□ 0.1
CCDC116Q8IYX3 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC15.65■□□□□ 0.1
CCDC116Q8IYX3 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC116Q8IYX3 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC15.65■□□□□ 0.1
CCDC116Q8IYX3 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC116Q8IYX3 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
CCDC116Q8IYX3 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC116Q8IYX3 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC116Q8IYX3 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
CCDC116Q8IYX3 GPAA1P2-202ENST00000606848 1787 ntBASIC15.64■□□□□ 0.1
CCDC116Q8IYX3 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCDC116Q8IYX3 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
CCDC116Q8IYX3 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCDC116Q8IYX3 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCDC116Q8IYX3 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
CCDC116Q8IYX3 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
CCDC116Q8IYX3 ZNF259P1-201ENST00000407656 1365 ntBASIC15.64■□□□□ 0.09
CCDC116Q8IYX3 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC15.64■□□□□ 0.09
CCDC116Q8IYX3 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
CCDC116Q8IYX3 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
CCDC116Q8IYX3 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CCDC116Q8IYX3 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC15.64■□□□□ 0.09
CCDC116Q8IYX3 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC15.64■□□□□ 0.09
CCDC116Q8IYX3 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCDC116Q8IYX3 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCDC116Q8IYX3 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
CCDC116Q8IYX3 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCDC116Q8IYX3 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCDC116Q8IYX3 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCDC116Q8IYX3 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC15.64■□□□□ 0.09
CCDC116Q8IYX3 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CCDC116Q8IYX3 DDT-204ENST00000404092 805 ntTSL 3 BASIC15.64■□□□□ 0.09
CCDC116Q8IYX3 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC15.64■□□□□ 0.09
CCDC116Q8IYX3 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CCDC116Q8IYX3 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC15.64■□□□□ 0.09
CCDC116Q8IYX3 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC15.64■□□□□ 0.09
CCDC116Q8IYX3 SLC25A1P1-201ENST00000528351 927 ntBASIC15.64■□□□□ 0.09
CCDC116Q8IYX3 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
CCDC116Q8IYX3 AC023141.13-201ENST00000604991 943 ntBASIC15.64■□□□□ 0.09
CCDC116Q8IYX3 AQP6-205ENST00000618286 829 ntTSL 5 BASIC15.64■□□□□ 0.09
CCDC116Q8IYX3 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC15.64■□□□□ 0.09
CCDC116Q8IYX3 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCDC116Q8IYX3 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC15.64■□□□□ 0.09
CCDC116Q8IYX3 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC15.64■□□□□ 0.09
CCDC116Q8IYX3 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CCDC116Q8IYX3 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
CCDC116Q8IYX3 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.09
CCDC116Q8IYX3 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC15.64■□□□□ 0.09
CCDC116Q8IYX3 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CCDC116Q8IYX3 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCDC116Q8IYX3 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
CCDC116Q8IYX3 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCDC116Q8IYX3 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CCDC116Q8IYX3 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
CCDC116Q8IYX3 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
CCDC116Q8IYX3 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCDC116Q8IYX3 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC15.64■□□□□ 0.09
CCDC116Q8IYX3 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
CCDC116Q8IYX3 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
CCDC116Q8IYX3 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CCDC116Q8IYX3 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CCDC116Q8IYX3 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC15.63■□□□□ 0.09
CCDC116Q8IYX3 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CCDC116Q8IYX3 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CCDC116Q8IYX3 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC15.63■□□□□ 0.09
CCDC116Q8IYX3 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CCDC116Q8IYX3 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
CCDC116Q8IYX3 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CCDC116Q8IYX3 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CCDC116Q8IYX3 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
CCDC116Q8IYX3 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CCDC116Q8IYX3 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CCDC116Q8IYX3 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CCDC116Q8IYX3 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC15.63■□□□□ 0.09
CCDC116Q8IYX3 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CCDC116Q8IYX3 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CCDC116Q8IYX3 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CCDC116Q8IYX3 LBH-204ENST00000406087 559 ntTSL 4 BASIC15.63■□□□□ 0.09
CCDC116Q8IYX3 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC15.63■□□□□ 0.09
CCDC116Q8IYX3 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC15.63■□□□□ 0.09
CCDC116Q8IYX3 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
CCDC116Q8IYX3 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC15.63■□□□□ 0.09
CCDC116Q8IYX3 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC15.63■□□□□ 0.09
CCDC116Q8IYX3 AC132872.1-201ENST00000566986 1195 ntBASIC15.63■□□□□ 0.09
CCDC116Q8IYX3 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CCDC116Q8IYX3 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC15.63■□□□□ 0.09
CCDC116Q8IYX3 AC004877.2-201ENST00000623941 599 ntBASIC15.63■□□□□ 0.09
CCDC116Q8IYX3 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
CCDC116Q8IYX3 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC15.63■□□□□ 0.09
CCDC116Q8IYX3 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CCDC116Q8IYX3 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC15.63■□□□□ 0.09
CCDC116Q8IYX3 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CCDC116Q8IYX3 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC15.63■□□□□ 0.09
CCDC116Q8IYX3 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CCDC116Q8IYX3 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms