Protein–RNA interactions for Protein: Q8IYI8

ZNF440, Zinc finger protein 440, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF440Q8IYI8 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC15.15■□□□□ 0.02
ZNF440Q8IYI8 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
ZNF440Q8IYI8 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ZNF440Q8IYI8 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
ZNF440Q8IYI8 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC15.15■□□□□ 0.02
ZNF440Q8IYI8 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
ZNF440Q8IYI8 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ZNF440Q8IYI8 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
ZNF440Q8IYI8 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC15.15■□□□□ 0.02
ZNF440Q8IYI8 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC15.15■□□□□ 0.02
ZNF440Q8IYI8 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC15.15■□□□□ 0.02
ZNF440Q8IYI8 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
ZNF440Q8IYI8 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC15.15■□□□□ 0.02
ZNF440Q8IYI8 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC15.14■□□□□ 0.01
ZNF440Q8IYI8 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ZNF440Q8IYI8 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ZNF440Q8IYI8 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
ZNF440Q8IYI8 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ZNF440Q8IYI8 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ZNF440Q8IYI8 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
ZNF440Q8IYI8 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
ZNF440Q8IYI8 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ZNF440Q8IYI8 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ZNF440Q8IYI8 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ZNF440Q8IYI8 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
ZNF440Q8IYI8 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
ZNF440Q8IYI8 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC15.14■□□□□ 0.01
ZNF440Q8IYI8 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ZNF440Q8IYI8 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ZNF440Q8IYI8 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC15.14■□□□□ 0.01
ZNF440Q8IYI8 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ZNF440Q8IYI8 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC15.14■□□□□ 0.01
ZNF440Q8IYI8 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ZNF440Q8IYI8 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
ZNF440Q8IYI8 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
ZNF440Q8IYI8 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ZNF440Q8IYI8 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ZNF440Q8IYI8 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
ZNF440Q8IYI8 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC15.14■□□□□ 0.01
ZNF440Q8IYI8 DDT-204ENST00000404092 805 ntTSL 3 BASIC15.14■□□□□ 0.01
ZNF440Q8IYI8 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC15.14■□□□□ 0.01
ZNF440Q8IYI8 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
ZNF440Q8IYI8 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
ZNF440Q8IYI8 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC15.14■□□□□ 0.01
ZNF440Q8IYI8 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC15.14■□□□□ 0.01
ZNF440Q8IYI8 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ZNF440Q8IYI8 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC15.14■□□□□ 0.01
ZNF440Q8IYI8 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
ZNF440Q8IYI8 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
ZNF440Q8IYI8 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ZNF440Q8IYI8 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
ZNF440Q8IYI8 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC15.14■□□□□ 0.01
ZNF440Q8IYI8 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
ZNF440Q8IYI8 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
ZNF440Q8IYI8 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
ZNF440Q8IYI8 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
ZNF440Q8IYI8 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC15.14■□□□□ 0.01
ZNF440Q8IYI8 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
ZNF440Q8IYI8 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
ZNF440Q8IYI8 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC15.14■□□□□ 0.01
ZNF440Q8IYI8 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
ZNF440Q8IYI8 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
ZNF440Q8IYI8 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC15.14■□□□□ 0.01
ZNF440Q8IYI8 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
ZNF440Q8IYI8 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC15.14■□□□□ 0.01
ZNF440Q8IYI8 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
ZNF440Q8IYI8 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
ZNF440Q8IYI8 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
ZNF440Q8IYI8 AC026691.1-201ENST00000602502 2017 ntBASIC15.14■□□□□ 0.01
ZNF440Q8IYI8 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
ZNF440Q8IYI8 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
ZNF440Q8IYI8 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ZNF440Q8IYI8 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC15.14■□□□□ 0.01
ZNF440Q8IYI8 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ZNF440Q8IYI8 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ZNF440Q8IYI8 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC15.13■□□□□ 0.01
ZNF440Q8IYI8 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
ZNF440Q8IYI8 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC15.13■□□□□ 0.01
ZNF440Q8IYI8 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
ZNF440Q8IYI8 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
ZNF440Q8IYI8 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ZNF440Q8IYI8 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC15.13■□□□□ 0.01
ZNF440Q8IYI8 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
ZNF440Q8IYI8 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ZNF440Q8IYI8 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
ZNF440Q8IYI8 BANP-204ENST00000393208 2283 ntTSL 2 BASIC15.13■□□□□ 0.01
ZNF440Q8IYI8 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
ZNF440Q8IYI8 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
ZNF440Q8IYI8 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC15.13■□□□□ 0.01
ZNF440Q8IYI8 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
ZNF440Q8IYI8 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ZNF440Q8IYI8 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ZNF440Q8IYI8 BEX3-201ENST00000361298 921 ntTSL 2 BASIC15.13■□□□□ 0.01
ZNF440Q8IYI8 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
ZNF440Q8IYI8 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
ZNF440Q8IYI8 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ZNF440Q8IYI8 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
ZNF440Q8IYI8 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC15.13■□□□□ 0.01
ZNF440Q8IYI8 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
ZNF440Q8IYI8 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms