Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC65Q8IXS2 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC18.4■□□□□ 0.54
CCDC65Q8IXS2 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC65Q8IXS2 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC65Q8IXS2 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC65Q8IXS2 CYP2T1P-202ENST00000641596 2535 ntBASIC18.4■□□□□ 0.54
CCDC65Q8IXS2 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CCDC65Q8IXS2 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CCDC65Q8IXS2 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC65Q8IXS2 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC65Q8IXS2 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC65Q8IXS2 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC65Q8IXS2 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC18.39■□□□□ 0.53
CCDC65Q8IXS2 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC65Q8IXS2 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
CCDC65Q8IXS2 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC65Q8IXS2 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC65Q8IXS2 HNRNPA1P28-201ENST00000424481 961 ntBASIC18.39■□□□□ 0.53
CCDC65Q8IXS2 AC140658.5-201ENST00000438532 169 ntBASIC18.39■□□□□ 0.53
CCDC65Q8IXS2 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC18.39■□□□□ 0.53
CCDC65Q8IXS2 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
CCDC65Q8IXS2 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC18.39■□□□□ 0.53
CCDC65Q8IXS2 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC65Q8IXS2 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
CCDC65Q8IXS2 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
CCDC65Q8IXS2 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC65Q8IXS2 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
CCDC65Q8IXS2 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
CCDC65Q8IXS2 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC18.39■□□□□ 0.53
CCDC65Q8IXS2 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC65Q8IXS2 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC65Q8IXS2 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC18.39■□□□□ 0.53
CCDC65Q8IXS2 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC65Q8IXS2 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
CCDC65Q8IXS2 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC65Q8IXS2 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC65Q8IXS2 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC65Q8IXS2 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC18.38■□□□□ 0.53
CCDC65Q8IXS2 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC65Q8IXS2 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC65Q8IXS2 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC65Q8IXS2 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC65Q8IXS2 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC18.38■□□□□ 0.53
CCDC65Q8IXS2 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC65Q8IXS2 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC18.38■□□□□ 0.53
CCDC65Q8IXS2 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
CCDC65Q8IXS2 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC18.38■□□□□ 0.53
CCDC65Q8IXS2 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC65Q8IXS2 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
CCDC65Q8IXS2 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC18.38■□□□□ 0.53
CCDC65Q8IXS2 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC18.38■□□□□ 0.53
CCDC65Q8IXS2 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC18.38■□□□□ 0.53
CCDC65Q8IXS2 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC65Q8IXS2 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC18.38■□□□□ 0.53
CCDC65Q8IXS2 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC18.38■□□□□ 0.53
CCDC65Q8IXS2 CD7-202ENST00000578509 925 ntTSL 3 BASIC18.38■□□□□ 0.53
CCDC65Q8IXS2 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC65Q8IXS2 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC65Q8IXS2 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC18.38■□□□□ 0.53
CCDC65Q8IXS2 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC18.38■□□□□ 0.53
CCDC65Q8IXS2 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC65Q8IXS2 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC65Q8IXS2 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC65Q8IXS2 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC65Q8IXS2 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
CCDC65Q8IXS2 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC18.38■□□□□ 0.53
CCDC65Q8IXS2 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC65Q8IXS2 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC18.38■□□□□ 0.53
CCDC65Q8IXS2 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC65Q8IXS2 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC65Q8IXS2 GCK-209ENST00000616242 2260 ntTSL 5 BASIC18.38■□□□□ 0.53
CCDC65Q8IXS2 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
CCDC65Q8IXS2 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC18.38■□□□□ 0.53
CCDC65Q8IXS2 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
CCDC65Q8IXS2 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC65Q8IXS2 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC65Q8IXS2 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC18.38■□□□□ 0.53
CCDC65Q8IXS2 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC65Q8IXS2 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC65Q8IXS2 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC65Q8IXS2 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC18.37■□□□□ 0.53
CCDC65Q8IXS2 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC65Q8IXS2 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC65Q8IXS2 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC65Q8IXS2 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC65Q8IXS2 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC65Q8IXS2 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC65Q8IXS2 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
CCDC65Q8IXS2 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC65Q8IXS2 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC18.37■□□□□ 0.53
CCDC65Q8IXS2 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC18.37■□□□□ 0.53
CCDC65Q8IXS2 AC074386.1-202ENST00000463561 864 ntBASIC18.37■□□□□ 0.53
CCDC65Q8IXS2 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC65Q8IXS2 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC18.37■□□□□ 0.53
CCDC65Q8IXS2 PDPK2P-202ENST00000562415 1191 ntBASIC18.37■□□□□ 0.53
CCDC65Q8IXS2 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC18.37■□□□□ 0.53
CCDC65Q8IXS2 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC18.37■□□□□ 0.53
CCDC65Q8IXS2 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC18.37■□□□□ 0.53
CCDC65Q8IXS2 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC18.37■□□□□ 0.53
CCDC65Q8IXS2 REM2-202ENST00000536884 1331 ntTSL 2 BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms