Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC16.61■□□□□ 0.25
TRIM42Q8IWZ5 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM42Q8IWZ5 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM42Q8IWZ5 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM42Q8IWZ5 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC16.61■□□□□ 0.25
TRIM42Q8IWZ5 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM42Q8IWZ5 AC022532.1-201ENST00000624563 1728 ntBASIC16.61■□□□□ 0.25
TRIM42Q8IWZ5 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC16.61■□□□□ 0.25
TRIM42Q8IWZ5 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM42Q8IWZ5 HARS-203ENST00000431330 1774 ntTSL 2 BASIC16.61■□□□□ 0.25
TRIM42Q8IWZ5 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM42Q8IWZ5 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
TRIM42Q8IWZ5 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM42Q8IWZ5 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM42Q8IWZ5 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM42Q8IWZ5 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC16.61■□□□□ 0.25
TRIM42Q8IWZ5 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRIM42Q8IWZ5 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC16.6■□□□□ 0.25
TRIM42Q8IWZ5 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
TRIM42Q8IWZ5 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
TRIM42Q8IWZ5 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM42Q8IWZ5 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM42Q8IWZ5 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
TRIM42Q8IWZ5 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC16.6■□□□□ 0.25
TRIM42Q8IWZ5 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
TRIM42Q8IWZ5 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM42Q8IWZ5 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM42Q8IWZ5 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM42Q8IWZ5 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM42Q8IWZ5 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC16.6■□□□□ 0.25
TRIM42Q8IWZ5 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
TRIM42Q8IWZ5 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
TRIM42Q8IWZ5 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
TRIM42Q8IWZ5 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM42Q8IWZ5 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC16.6■□□□□ 0.25
TRIM42Q8IWZ5 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM42Q8IWZ5 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM42Q8IWZ5 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM42Q8IWZ5 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC16.6■□□□□ 0.25
TRIM42Q8IWZ5 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM42Q8IWZ5 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC16.6■□□□□ 0.25
TRIM42Q8IWZ5 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC16.6■□□□□ 0.25
TRIM42Q8IWZ5 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC16.6■□□□□ 0.25
TRIM42Q8IWZ5 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM42Q8IWZ5 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM42Q8IWZ5 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
TRIM42Q8IWZ5 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC16.6■□□□□ 0.25
TRIM42Q8IWZ5 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM42Q8IWZ5 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM42Q8IWZ5 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
TRIM42Q8IWZ5 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC16.6■□□□□ 0.25
TRIM42Q8IWZ5 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM42Q8IWZ5 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
TRIM42Q8IWZ5 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM42Q8IWZ5 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM42Q8IWZ5 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
TRIM42Q8IWZ5 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM42Q8IWZ5 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC16.59■□□□□ 0.25
TRIM42Q8IWZ5 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC16.59■□□□□ 0.25
TRIM42Q8IWZ5 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC16.59■□□□□ 0.25
TRIM42Q8IWZ5 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC16.59■□□□□ 0.25
TRIM42Q8IWZ5 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM42Q8IWZ5 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC16.59■□□□□ 0.25
TRIM42Q8IWZ5 AC097637.2-201ENST00000624096 1997 ntBASIC16.59■□□□□ 0.25
TRIM42Q8IWZ5 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM42Q8IWZ5 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM42Q8IWZ5 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM42Q8IWZ5 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM42Q8IWZ5 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC16.59■□□□□ 0.25
TRIM42Q8IWZ5 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
TRIM42Q8IWZ5 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC16.59■□□□□ 0.25
TRIM42Q8IWZ5 COX5A-202ENST00000562233 441 ntTSL 3 BASIC16.59■□□□□ 0.25
TRIM42Q8IWZ5 COX5A-204ENST00000567270 579 ntTSL 3 BASIC16.59■□□□□ 0.25
TRIM42Q8IWZ5 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
TRIM42Q8IWZ5 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
TRIM42Q8IWZ5 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC16.59■□□□□ 0.25
TRIM42Q8IWZ5 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC16.59■□□□□ 0.25
TRIM42Q8IWZ5 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC16.59■□□□□ 0.25
TRIM42Q8IWZ5 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM42Q8IWZ5 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
TRIM42Q8IWZ5 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM42Q8IWZ5 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC16.59■□□□□ 0.25
TRIM42Q8IWZ5 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM42Q8IWZ5 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM42Q8IWZ5 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM42Q8IWZ5 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
TRIM42Q8IWZ5 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM42Q8IWZ5 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC16.59■□□□□ 0.25
TRIM42Q8IWZ5 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM42Q8IWZ5 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
TRIM42Q8IWZ5 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC16.59■□□□□ 0.25
TRIM42Q8IWZ5 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM42Q8IWZ5 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
TRIM42Q8IWZ5 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
TRIM42Q8IWZ5 MIR600HG-201ENST00000449175 5984 ntBASIC16.58■□□□□ 0.25
TRIM42Q8IWZ5 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
TRIM42Q8IWZ5 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TRIM42Q8IWZ5 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
TRIM42Q8IWZ5 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TRIM42Q8IWZ5 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms