Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
TRIM48Q8IWZ4 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TRIM48Q8IWZ4 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC16.29■□□□□ 0.2
TRIM48Q8IWZ4 AC022145.2-201ENST00000598203 171 ntBASIC16.29■□□□□ 0.2
TRIM48Q8IWZ4 AC021097.1-201ENST00000607902 574 ntBASIC16.29■□□□□ 0.2
TRIM48Q8IWZ4 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
TRIM48Q8IWZ4 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC16.29■□□□□ 0.2
TRIM48Q8IWZ4 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC16.29■□□□□ 0.2
TRIM48Q8IWZ4 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRIM48Q8IWZ4 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
TRIM48Q8IWZ4 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
TRIM48Q8IWZ4 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRIM48Q8IWZ4 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRIM48Q8IWZ4 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC16.29■□□□□ 0.2
TRIM48Q8IWZ4 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC16.29■□□□□ 0.2
TRIM48Q8IWZ4 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRIM48Q8IWZ4 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRIM48Q8IWZ4 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRIM48Q8IWZ4 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRIM48Q8IWZ4 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC16.29■□□□□ 0.2
TRIM48Q8IWZ4 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRIM48Q8IWZ4 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM48Q8IWZ4 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
TRIM48Q8IWZ4 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM48Q8IWZ4 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC16.28■□□□□ 0.2
TRIM48Q8IWZ4 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
TRIM48Q8IWZ4 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM48Q8IWZ4 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM48Q8IWZ4 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM48Q8IWZ4 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
TRIM48Q8IWZ4 AC011676.5-201ENST00000624864 2660 ntBASIC16.28■□□□□ 0.2
TRIM48Q8IWZ4 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM48Q8IWZ4 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
TRIM48Q8IWZ4 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM48Q8IWZ4 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM48Q8IWZ4 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM48Q8IWZ4 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM48Q8IWZ4 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM48Q8IWZ4 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC16.28■□□□□ 0.2
TRIM48Q8IWZ4 AC004461.1-201ENST00000412461 403 ntBASIC16.28■□□□□ 0.2
TRIM48Q8IWZ4 PMS2P2-201ENST00000425039 1128 ntBASIC16.28■□□□□ 0.2
TRIM48Q8IWZ4 WDR53-204ENST00000433160 887 ntTSL 5 BASIC16.28■□□□□ 0.2
TRIM48Q8IWZ4 AC005237.2-201ENST00000434368 219 ntBASIC16.28■□□□□ 0.2
TRIM48Q8IWZ4 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC16.28■□□□□ 0.2
TRIM48Q8IWZ4 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
TRIM48Q8IWZ4 IGHV3-62-201ENST00000520057 340 ntBASIC16.28■□□□□ 0.2
TRIM48Q8IWZ4 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC16.28■□□□□ 0.2
TRIM48Q8IWZ4 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC16.28■□□□□ 0.2
TRIM48Q8IWZ4 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC16.28■□□□□ 0.2
TRIM48Q8IWZ4 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC16.28■□□□□ 0.2
TRIM48Q8IWZ4 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC16.28■□□□□ 0.2
TRIM48Q8IWZ4 MIR3909-201ENST00000579518 119 ntBASIC16.28■□□□□ 0.2
TRIM48Q8IWZ4 MIR4492-201ENST00000581627 80 ntBASIC16.28■□□□□ 0.2
TRIM48Q8IWZ4 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
TRIM48Q8IWZ4 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM48Q8IWZ4 LTF-203ENST00000426532 2494 ntTSL 2 BASIC16.28■□□□□ 0.2
TRIM48Q8IWZ4 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
TRIM48Q8IWZ4 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
TRIM48Q8IWZ4 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM48Q8IWZ4 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
TRIM48Q8IWZ4 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM48Q8IWZ4 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
TRIM48Q8IWZ4 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC16.28■□□□□ 0.2
TRIM48Q8IWZ4 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM48Q8IWZ4 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM48Q8IWZ4 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC16.28■□□□□ 0.2
TRIM48Q8IWZ4 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM48Q8IWZ4 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM48Q8IWZ4 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM48Q8IWZ4 WASH6P-202ENST00000359512 1437 ntBASIC16.28■□□□□ 0.2
TRIM48Q8IWZ4 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM48Q8IWZ4 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
TRIM48Q8IWZ4 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM48Q8IWZ4 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TRIM48Q8IWZ4 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TRIM48Q8IWZ4 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRIM48Q8IWZ4 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC16.27■□□□□ 0.2
TRIM48Q8IWZ4 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRIM48Q8IWZ4 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TRIM48Q8IWZ4 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
TRIM48Q8IWZ4 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRIM48Q8IWZ4 NKILA-202ENST00000614771 2598 ntBASIC16.27■□□□□ 0.2
TRIM48Q8IWZ4 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRIM48Q8IWZ4 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC16.27■□□□□ 0.2
TRIM48Q8IWZ4 AC092474.2-201ENST00000424288 719 ntBASIC16.27■□□□□ 0.2
TRIM48Q8IWZ4 ADH5P3-201ENST00000433842 1137 ntBASIC16.27■□□□□ 0.2
TRIM48Q8IWZ4 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TRIM48Q8IWZ4 AL592309.1-201ENST00000443127 649 ntBASIC16.27■□□□□ 0.2
TRIM48Q8IWZ4 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC16.27■□□□□ 0.2
TRIM48Q8IWZ4 KRT8P48-201ENST00000515599 1220 ntBASIC16.27■□□□□ 0.2
TRIM48Q8IWZ4 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC16.27■□□□□ 0.2
TRIM48Q8IWZ4 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC16.27■□□□□ 0.2
TRIM48Q8IWZ4 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC16.27■□□□□ 0.2
TRIM48Q8IWZ4 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC16.27■□□□□ 0.2
TRIM48Q8IWZ4 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC16.27■□□□□ 0.2
TRIM48Q8IWZ4 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRIM48Q8IWZ4 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC16.27■□□□□ 0.19
TRIM48Q8IWZ4 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC16.27■□□□□ 0.19
TRIM48Q8IWZ4 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC16.27■□□□□ 0.19
TRIM48Q8IWZ4 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC16.27■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms