Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
SCN4BQ8IWT1 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
SCN4BQ8IWT1 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
SCN4BQ8IWT1 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
SCN4BQ8IWT1 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
SCN4BQ8IWT1 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SCN4BQ8IWT1 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
SCN4BQ8IWT1 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
SCN4BQ8IWT1 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
SCN4BQ8IWT1 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
SCN4BQ8IWT1 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SCN4BQ8IWT1 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC17.44■□□□□ 0.38
SCN4BQ8IWT1 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
SCN4BQ8IWT1 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.44■□□□□ 0.38
SCN4BQ8IWT1 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC17.44■□□□□ 0.38
SCN4BQ8IWT1 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SCN4BQ8IWT1 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SCN4BQ8IWT1 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SCN4BQ8IWT1 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SCN4BQ8IWT1 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
SCN4BQ8IWT1 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SCN4BQ8IWT1 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SCN4BQ8IWT1 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SCN4BQ8IWT1 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC17.44■□□□□ 0.38
SCN4BQ8IWT1 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC17.44■□□□□ 0.38
SCN4BQ8IWT1 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC17.44■□□□□ 0.38
SCN4BQ8IWT1 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC17.44■□□□□ 0.38
SCN4BQ8IWT1 AC069262.1-201ENST00000539058 672 ntBASIC17.44■□□□□ 0.38
SCN4BQ8IWT1 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
SCN4BQ8IWT1 MIR6080-201ENST00000617359 66 ntBASIC17.44■□□□□ 0.38
SCN4BQ8IWT1 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SCN4BQ8IWT1 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SCN4BQ8IWT1 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
SCN4BQ8IWT1 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SCN4BQ8IWT1 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
SCN4BQ8IWT1 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC17.44■□□□□ 0.38
SCN4BQ8IWT1 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SCN4BQ8IWT1 AMT-206ENST00000458307 1860 ntTSL 2 BASIC17.44■□□□□ 0.38
SCN4BQ8IWT1 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SCN4BQ8IWT1 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC17.44■□□□□ 0.38
SCN4BQ8IWT1 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
SCN4BQ8IWT1 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SCN4BQ8IWT1 AC073439.1-201ENST00000624121 1774 ntBASIC17.43■□□□□ 0.38
SCN4BQ8IWT1 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SCN4BQ8IWT1 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SCN4BQ8IWT1 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC17.43■□□□□ 0.38
SCN4BQ8IWT1 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SCN4BQ8IWT1 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
SCN4BQ8IWT1 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SCN4BQ8IWT1 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SCN4BQ8IWT1 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC17.43■□□□□ 0.38
SCN4BQ8IWT1 MIR770-201ENST00000390219 98 ntBASIC17.43■□□□□ 0.38
SCN4BQ8IWT1 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC17.43■□□□□ 0.38
SCN4BQ8IWT1 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
SCN4BQ8IWT1 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC17.43■□□□□ 0.38
SCN4BQ8IWT1 AC067863.1-201ENST00000494933 530 ntBASIC17.43■□□□□ 0.38
SCN4BQ8IWT1 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SCN4BQ8IWT1 AL512356.2-201ENST00000546955 174 ntBASIC17.43■□□□□ 0.38
SCN4BQ8IWT1 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC17.43■□□□□ 0.38
SCN4BQ8IWT1 QPRT-203ENST00000562473 579 ntTSL 3 BASIC17.43■□□□□ 0.38
SCN4BQ8IWT1 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC17.43■□□□□ 0.38
SCN4BQ8IWT1 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SCN4BQ8IWT1 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC17.43■□□□□ 0.38
SCN4BQ8IWT1 AC008677.1-201ENST00000519230 1561 ntBASIC17.43■□□□□ 0.38
SCN4BQ8IWT1 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
SCN4BQ8IWT1 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
SCN4BQ8IWT1 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17.43■□□□□ 0.38
SCN4BQ8IWT1 TUBB3P1-201ENST00000405796 1332 ntBASIC17.43■□□□□ 0.38
SCN4BQ8IWT1 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
SCN4BQ8IWT1 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC17.43■□□□□ 0.38
SCN4BQ8IWT1 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SCN4BQ8IWT1 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC17.43■□□□□ 0.38
SCN4BQ8IWT1 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
SCN4BQ8IWT1 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
SCN4BQ8IWT1 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC17.42■□□□□ 0.38
SCN4BQ8IWT1 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
SCN4BQ8IWT1 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SCN4BQ8IWT1 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SCN4BQ8IWT1 CD81-202ENST00000381036 880 ntTSL 3 BASIC17.42■□□□□ 0.38
SCN4BQ8IWT1 PP14571-201ENST00000404327 934 ntTSL 2 BASIC17.42■□□□□ 0.38
SCN4BQ8IWT1 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC17.42■□□□□ 0.38
SCN4BQ8IWT1 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SCN4BQ8IWT1 SYS1-203ENST00000414310 795 ntTSL 3 BASIC17.42■□□□□ 0.38
SCN4BQ8IWT1 AC142381.1-201ENST00000426099 345 ntBASIC17.42■□□□□ 0.38
SCN4BQ8IWT1 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC17.42■□□□□ 0.38
SCN4BQ8IWT1 GATD1-206ENST00000526325 756 ntTSL 5 BASIC17.42■□□□□ 0.38
SCN4BQ8IWT1 DUX4L27-201ENST00000554796 1261 ntBASIC17.42■□□□□ 0.38
SCN4BQ8IWT1 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC17.42■□□□□ 0.38
SCN4BQ8IWT1 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC17.42■□□□□ 0.38
SCN4BQ8IWT1 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
SCN4BQ8IWT1 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC17.42■□□□□ 0.38
SCN4BQ8IWT1 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SCN4BQ8IWT1 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SCN4BQ8IWT1 AL031731.1-201ENST00000642131 2094 ntBASIC17.42■□□□□ 0.38
SCN4BQ8IWT1 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
SCN4BQ8IWT1 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC17.42■□□□□ 0.38
SCN4BQ8IWT1 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC17.42■□□□□ 0.38
SCN4BQ8IWT1 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
SCN4BQ8IWT1 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SCN4BQ8IWT1 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms