Protein–RNA interactions for Protein: Q8IWF9

CCDC83, Coiled-coil domain-containing protein 83, humanhuman

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC83Q8IWF9 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC83Q8IWF9 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC19.49■□□□□ 0.71
CCDC83Q8IWF9 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC19.49■□□□□ 0.71
CCDC83Q8IWF9 MRPL20P1-201ENST00000400819 433 ntBASIC19.49■□□□□ 0.71
CCDC83Q8IWF9 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC83Q8IWF9 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
CCDC83Q8IWF9 HCG4-201ENST00000418983 998 ntBASIC19.49■□□□□ 0.71
CCDC83Q8IWF9 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC19.49■□□□□ 0.71
CCDC83Q8IWF9 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
CCDC83Q8IWF9 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC19.49■□□□□ 0.71
CCDC83Q8IWF9 AL049840.3-201ENST00000602669 611 ntBASIC19.49■□□□□ 0.71
CCDC83Q8IWF9 IRF5-214ENST00000613821 595 ntTSL 5 BASIC19.49■□□□□ 0.71
CCDC83Q8IWF9 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC19.49■□□□□ 0.71
CCDC83Q8IWF9 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC83Q8IWF9 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC83Q8IWF9 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC83Q8IWF9 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC19.49■□□□□ 0.71
CCDC83Q8IWF9 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC83Q8IWF9 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC83Q8IWF9 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC19.49■□□□□ 0.71
CCDC83Q8IWF9 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
CCDC83Q8IWF9 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC19.49■□□□□ 0.71
CCDC83Q8IWF9 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC19.49■□□□□ 0.71
CCDC83Q8IWF9 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC19.49■□□□□ 0.71
CCDC83Q8IWF9 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC19.49■□□□□ 0.71
CCDC83Q8IWF9 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC83Q8IWF9 SP100-205ENST00000409824 1802 ntTSL 5 BASIC19.48■□□□□ 0.71
CCDC83Q8IWF9 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC83Q8IWF9 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC83Q8IWF9 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC83Q8IWF9 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC83Q8IWF9 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC19.48■□□□□ 0.71
CCDC83Q8IWF9 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC83Q8IWF9 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC83Q8IWF9 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC83Q8IWF9 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC83Q8IWF9 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC19.48■□□□□ 0.71
CCDC83Q8IWF9 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC83Q8IWF9 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC19.48■□□□□ 0.71
CCDC83Q8IWF9 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC83Q8IWF9 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC19.48■□□□□ 0.71
CCDC83Q8IWF9 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC19.48■□□□□ 0.71
CCDC83Q8IWF9 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
CCDC83Q8IWF9 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC83Q8IWF9 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC19.48■□□□□ 0.71
CCDC83Q8IWF9 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC83Q8IWF9 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC19.48■□□□□ 0.71
CCDC83Q8IWF9 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC19.48■□□□□ 0.71
CCDC83Q8IWF9 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC19.48■□□□□ 0.71
CCDC83Q8IWF9 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC19.48■□□□□ 0.71
CCDC83Q8IWF9 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC83Q8IWF9 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC83Q8IWF9 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC83Q8IWF9 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC83Q8IWF9 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC83Q8IWF9 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC83Q8IWF9 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC83Q8IWF9 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
CCDC83Q8IWF9 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC83Q8IWF9 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC83Q8IWF9 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC83Q8IWF9 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC83Q8IWF9 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC83Q8IWF9 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC19.47■□□□□ 0.71
CCDC83Q8IWF9 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC19.47■□□□□ 0.71
CCDC83Q8IWF9 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC83Q8IWF9 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC83Q8IWF9 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC19.47■□□□□ 0.71
CCDC83Q8IWF9 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC83Q8IWF9 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC19.47■□□□□ 0.71
CCDC83Q8IWF9 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
CCDC83Q8IWF9 AC092910.1-201ENST00000482027 1129 ntBASIC19.47■□□□□ 0.71
CCDC83Q8IWF9 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC19.47■□□□□ 0.71
CCDC83Q8IWF9 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC19.47■□□□□ 0.71
CCDC83Q8IWF9 AL603832.2-201ENST00000566195 2125 ntBASIC19.47■□□□□ 0.71
CCDC83Q8IWF9 RN7SL510P-201ENST00000581311 263 ntBASIC19.47■□□□□ 0.71
CCDC83Q8IWF9 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
CCDC83Q8IWF9 ACTL9-202ENST00000612068 1252 ntBASIC19.47■□□□□ 0.71
CCDC83Q8IWF9 AC010654.1-201ENST00000615722 808 ntBASIC19.47■□□□□ 0.71
CCDC83Q8IWF9 AL031008.1-201ENST00000619963 541 ntBASIC19.47■□□□□ 0.71
CCDC83Q8IWF9 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC83Q8IWF9 LINC01144-201ENST00000626198 1710 ntBASIC19.47■□□□□ 0.71
CCDC83Q8IWF9 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC19.47■□□□□ 0.71
CCDC83Q8IWF9 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CCDC83Q8IWF9 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC19.46■□□□□ 0.71
CCDC83Q8IWF9 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC83Q8IWF9 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC83Q8IWF9 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC19.46■□□□□ 0.71
CCDC83Q8IWF9 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
CCDC83Q8IWF9 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC83Q8IWF9 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC19.46■□□□□ 0.71
CCDC83Q8IWF9 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
CCDC83Q8IWF9 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC83Q8IWF9 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC83Q8IWF9 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC83Q8IWF9 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC83Q8IWF9 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC83Q8IWF9 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
CCDC83Q8IWF9 MIR7706-201ENST00000613747 67 ntBASIC19.46■□□□□ 0.71
CCDC83Q8IWF9 PGM5P2-202ENST00000637225 1043 ntBASIC19.46■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 65.6 ms