Protein–RNA interactions for Protein: Q86VP3

PACS2, Phosphofurin acidic cluster sorting protein 2, humanhuman

Predictions only

Length 889 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS2Q86VP3 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PACS2Q86VP3 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC16.76■□□□□ 0.27
PACS2Q86VP3 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC16.76■□□□□ 0.27
PACS2Q86VP3 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PACS2Q86VP3 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PACS2Q86VP3 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PACS2Q86VP3 AC117489.1-201ENST00000625169 3217 ntBASIC16.75■□□□□ 0.27
PACS2Q86VP3 ASL-204ENST00000395331 1538 ntTSL 5 BASIC16.75■□□□□ 0.27
PACS2Q86VP3 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
PACS2Q86VP3 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
PACS2Q86VP3 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
PACS2Q86VP3 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
PACS2Q86VP3 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
PACS2Q86VP3 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PACS2Q86VP3 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
PACS2Q86VP3 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
PACS2Q86VP3 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PACS2Q86VP3 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PACS2Q86VP3 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PACS2Q86VP3 MIR662-201ENST00000384847 95 ntBASIC16.75■□□□□ 0.27
PACS2Q86VP3 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC16.75■□□□□ 0.27
PACS2Q86VP3 KRT18P48-201ENST00000434763 852 ntBASIC16.75■□□□□ 0.27
PACS2Q86VP3 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC16.75■□□□□ 0.27
PACS2Q86VP3 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC16.75■□□□□ 0.27
PACS2Q86VP3 PTK2-216ENST00000519881 863 ntTSL 3 BASIC16.75■□□□□ 0.27
PACS2Q86VP3 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC16.75■□□□□ 0.27
PACS2Q86VP3 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC16.75■□□□□ 0.27
PACS2Q86VP3 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
PACS2Q86VP3 COCH-203ENST00000460581 2688 ntTSL 2 BASIC16.75■□□□□ 0.27
PACS2Q86VP3 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
PACS2Q86VP3 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PACS2Q86VP3 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
PACS2Q86VP3 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PACS2Q86VP3 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
PACS2Q86VP3 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PACS2Q86VP3 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PACS2Q86VP3 AC010327.5-201ENST00000586923 3061 ntBASIC16.75■□□□□ 0.27
PACS2Q86VP3 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PACS2Q86VP3 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PACS2Q86VP3 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
PACS2Q86VP3 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PACS2Q86VP3 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.75■□□□□ 0.27
PACS2Q86VP3 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
PACS2Q86VP3 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC16.75■□□□□ 0.27
PACS2Q86VP3 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC16.75■□□□□ 0.27
PACS2Q86VP3 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC16.75■□□□□ 0.27
PACS2Q86VP3 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
PACS2Q86VP3 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PACS2Q86VP3 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC16.74■□□□□ 0.27
PACS2Q86VP3 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC16.74■□□□□ 0.27
PACS2Q86VP3 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
PACS2Q86VP3 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
PACS2Q86VP3 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
PACS2Q86VP3 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PACS2Q86VP3 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PACS2Q86VP3 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PACS2Q86VP3 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PACS2Q86VP3 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
PACS2Q86VP3 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PACS2Q86VP3 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
PACS2Q86VP3 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC16.74■□□□□ 0.27
PACS2Q86VP3 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PACS2Q86VP3 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PACS2Q86VP3 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
PACS2Q86VP3 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16.74■□□□□ 0.27
PACS2Q86VP3 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC16.74■□□□□ 0.27
PACS2Q86VP3 AC009090.5-201ENST00000624886 2285 ntBASIC16.74■□□□□ 0.27
PACS2Q86VP3 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC16.74■□□□□ 0.27
PACS2Q86VP3 FXN-203ENST00000396366 922 ntTSL 2 BASIC16.74■□□□□ 0.27
PACS2Q86VP3 UPK3BP1-201ENST00000428678 509 ntBASIC16.74■□□□□ 0.27
PACS2Q86VP3 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
PACS2Q86VP3 SPDYE13P-201ENST00000445314 798 ntBASIC16.74■□□□□ 0.27
PACS2Q86VP3 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC16.74■□□□□ 0.27
PACS2Q86VP3 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC16.74■□□□□ 0.27
PACS2Q86VP3 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC16.74■□□□□ 0.27
PACS2Q86VP3 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC16.74■□□□□ 0.27
PACS2Q86VP3 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC16.74■□□□□ 0.27
PACS2Q86VP3 AC024563.2-201ENST00000603282 481 ntBASIC16.74■□□□□ 0.27
PACS2Q86VP3 NDUFV2-AS1-203ENST00000608008 779 ntBASIC16.74■□□□□ 0.27
PACS2Q86VP3 LITAF-220ENST00000620789 692 ntTSL 5 BASIC16.74■□□□□ 0.27
PACS2Q86VP3 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC16.74■□□□□ 0.27
PACS2Q86VP3 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PACS2Q86VP3 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
PACS2Q86VP3 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC16.74■□□□□ 0.27
PACS2Q86VP3 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
PACS2Q86VP3 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
PACS2Q86VP3 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PACS2Q86VP3 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
PACS2Q86VP3 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
PACS2Q86VP3 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PACS2Q86VP3 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
PACS2Q86VP3 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PACS2Q86VP3 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC16.73■□□□□ 0.27
PACS2Q86VP3 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC16.73■□□□□ 0.27
PACS2Q86VP3 USP31-203ENST00000567975 2142 ntTSL 2 BASIC16.73■□□□□ 0.27
PACS2Q86VP3 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
PACS2Q86VP3 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
PACS2Q86VP3 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC16.73■□□□□ 0.27
PACS2Q86VP3 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PACS2Q86VP3 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 67.8 ms