Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
CTR9Q6PD62 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CTR9Q6PD62 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC19.64■□□□□ 0.73
CTR9Q6PD62 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC19.64■□□□□ 0.73
CTR9Q6PD62 PRYP6-201ENST00000514804 343 ntBASIC19.64■□□□□ 0.73
CTR9Q6PD62 AC105233.2-201ENST00000523697 349 ntBASIC19.64■□□□□ 0.73
CTR9Q6PD62 GATD1-206ENST00000526325 756 ntTSL 5 BASIC19.64■□□□□ 0.73
CTR9Q6PD62 AF228730.5-201ENST00000530288 346 ntBASIC19.64■□□□□ 0.73
CTR9Q6PD62 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC19.64■□□□□ 0.73
CTR9Q6PD62 AL355385.1-201ENST00000606123 409 ntBASIC19.64■□□□□ 0.73
CTR9Q6PD62 AC106028.4-201ENST00000614509 607 ntBASIC19.64■□□□□ 0.73
CTR9Q6PD62 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC19.64■□□□□ 0.73
CTR9Q6PD62 Z92544.3-201ENST00000624747 417 ntBASIC19.64■□□□□ 0.73
CTR9Q6PD62 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
CTR9Q6PD62 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC19.64■□□□□ 0.73
CTR9Q6PD62 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC19.64■□□□□ 0.73
CTR9Q6PD62 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CTR9Q6PD62 HLA-A-202ENST00000376806 1854 ntBASIC19.64■□□□□ 0.73
CTR9Q6PD62 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CTR9Q6PD62 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
CTR9Q6PD62 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC19.64■□□□□ 0.73
CTR9Q6PD62 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CTR9Q6PD62 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CTR9Q6PD62 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.73
CTR9Q6PD62 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
CTR9Q6PD62 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CTR9Q6PD62 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CTR9Q6PD62 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC19.63■□□□□ 0.73
CTR9Q6PD62 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC19.63■□□□□ 0.73
CTR9Q6PD62 UBALD1-205ENST00000590891 2641 ntBASIC19.63■□□□□ 0.73
CTR9Q6PD62 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CTR9Q6PD62 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
CTR9Q6PD62 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CTR9Q6PD62 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CTR9Q6PD62 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
CTR9Q6PD62 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
CTR9Q6PD62 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC19.63■□□□□ 0.73
CTR9Q6PD62 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CTR9Q6PD62 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CTR9Q6PD62 HNRNPFP1-201ENST00000391730 1133 ntBASIC19.63■□□□□ 0.73
CTR9Q6PD62 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
CTR9Q6PD62 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC19.63■□□□□ 0.73
CTR9Q6PD62 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC19.63■□□□□ 0.73
CTR9Q6PD62 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC19.63■□□□□ 0.73
CTR9Q6PD62 ALG1L8P-201ENST00000533887 760 ntBASIC19.63■□□□□ 0.73
CTR9Q6PD62 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC19.63■□□□□ 0.73
CTR9Q6PD62 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CTR9Q6PD62 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC19.63■□□□□ 0.73
CTR9Q6PD62 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC19.63■□□□□ 0.73
CTR9Q6PD62 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC19.63■□□□□ 0.73
CTR9Q6PD62 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC19.63■□□□□ 0.73
CTR9Q6PD62 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC19.63■□□□□ 0.73
CTR9Q6PD62 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CTR9Q6PD62 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CTR9Q6PD62 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC19.63■□□□□ 0.73
CTR9Q6PD62 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CTR9Q6PD62 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CTR9Q6PD62 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
CTR9Q6PD62 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CTR9Q6PD62 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
CTR9Q6PD62 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC19.63■□□□□ 0.73
CTR9Q6PD62 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CTR9Q6PD62 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC19.62■□□□□ 0.73
CTR9Q6PD62 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CTR9Q6PD62 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CTR9Q6PD62 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CTR9Q6PD62 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CTR9Q6PD62 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CTR9Q6PD62 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC19.62■□□□□ 0.73
CTR9Q6PD62 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
CTR9Q6PD62 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CTR9Q6PD62 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CTR9Q6PD62 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC19.62■□□□□ 0.73
CTR9Q6PD62 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC19.62■□□□□ 0.73
CTR9Q6PD62 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CTR9Q6PD62 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CTR9Q6PD62 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CTR9Q6PD62 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
CTR9Q6PD62 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CTR9Q6PD62 CD81-202ENST00000381036 880 ntTSL 3 BASIC19.62■□□□□ 0.73
CTR9Q6PD62 PNMT-202ENST00000394246 821 ntTSL 2 BASIC19.62■□□□□ 0.73
CTR9Q6PD62 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
CTR9Q6PD62 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC19.62■□□□□ 0.73
CTR9Q6PD62 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC19.62■□□□□ 0.73
CTR9Q6PD62 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC19.62■□□□□ 0.73
CTR9Q6PD62 VPS29-207ENST00000549970 818 ntTSL 3 BASIC19.62■□□□□ 0.73
CTR9Q6PD62 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CTR9Q6PD62 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CTR9Q6PD62 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CTR9Q6PD62 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CTR9Q6PD62 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CTR9Q6PD62 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CTR9Q6PD62 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
CTR9Q6PD62 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC19.62■□□□□ 0.73
CTR9Q6PD62 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC19.62■□□□□ 0.73
CTR9Q6PD62 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CTR9Q6PD62 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC19.62■□□□□ 0.73
CTR9Q6PD62 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CTR9Q6PD62 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC19.61■□□□□ 0.73
CTR9Q6PD62 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 62.2 ms