Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 STK25P1-201ENST00000585406 838 ntBASIC15.29■□□□□ 0.04
TMEM53Q6P2H8 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC15.29■□□□□ 0.04
TMEM53Q6P2H8 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC15.29■□□□□ 0.04
TMEM53Q6P2H8 IGHV3OR16-7-201ENST00000604106 360 ntBASIC15.29■□□□□ 0.04
TMEM53Q6P2H8 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TMEM53Q6P2H8 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC15.29■□□□□ 0.04
TMEM53Q6P2H8 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC15.29■□□□□ 0.04
TMEM53Q6P2H8 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
TMEM53Q6P2H8 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TMEM53Q6P2H8 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC15.29■□□□□ 0.04
TMEM53Q6P2H8 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
TMEM53Q6P2H8 AL359183.1-201ENST00000623796 2132 ntBASIC15.29■□□□□ 0.04
TMEM53Q6P2H8 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TMEM53Q6P2H8 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
TMEM53Q6P2H8 AC023908.3-201ENST00000564211 3047 ntBASIC15.29■□□□□ 0.04
TMEM53Q6P2H8 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
TMEM53Q6P2H8 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TMEM53Q6P2H8 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TMEM53Q6P2H8 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TMEM53Q6P2H8 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TMEM53Q6P2H8 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TMEM53Q6P2H8 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TMEM53Q6P2H8 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC15.29■□□□□ 0.04
TMEM53Q6P2H8 AC006058.4-201ENST00000624016 1670 ntBASIC15.28■□□□□ 0.04
TMEM53Q6P2H8 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TMEM53Q6P2H8 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TMEM53Q6P2H8 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
TMEM53Q6P2H8 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TMEM53Q6P2H8 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TMEM53Q6P2H8 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC15.28■□□□□ 0.04
TMEM53Q6P2H8 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
TMEM53Q6P2H8 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC15.28■□□□□ 0.04
TMEM53Q6P2H8 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TMEM53Q6P2H8 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TMEM53Q6P2H8 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
TMEM53Q6P2H8 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
TMEM53Q6P2H8 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC15.28■□□□□ 0.04
TMEM53Q6P2H8 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC15.28■□□□□ 0.04
TMEM53Q6P2H8 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
TMEM53Q6P2H8 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC15.28■□□□□ 0.04
TMEM53Q6P2H8 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TMEM53Q6P2H8 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TMEM53Q6P2H8 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TMEM53Q6P2H8 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC15.28■□□□□ 0.04
TMEM53Q6P2H8 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TMEM53Q6P2H8 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TMEM53Q6P2H8 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TMEM53Q6P2H8 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TMEM53Q6P2H8 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
TMEM53Q6P2H8 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TMEM53Q6P2H8 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TMEM53Q6P2H8 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TMEM53Q6P2H8 AC132008.2-207ENST00000454517 770 ntBASIC15.28■□□□□ 0.04
TMEM53Q6P2H8 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
TMEM53Q6P2H8 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC15.28■□□□□ 0.04
TMEM53Q6P2H8 AL732292.2-201ENST00000609649 430 ntBASIC15.28■□□□□ 0.04
TMEM53Q6P2H8 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC15.28■□□□□ 0.04
TMEM53Q6P2H8 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TMEM53Q6P2H8 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TMEM53Q6P2H8 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
TMEM53Q6P2H8 AMT-250ENST00000637682 1823 ntTSL 5 BASIC15.28■□□□□ 0.04
TMEM53Q6P2H8 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TMEM53Q6P2H8 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TMEM53Q6P2H8 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TMEM53Q6P2H8 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TMEM53Q6P2H8 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
TMEM53Q6P2H8 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TMEM53Q6P2H8 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC15.28■□□□□ 0.04
TMEM53Q6P2H8 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TMEM53Q6P2H8 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TMEM53Q6P2H8 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TMEM53Q6P2H8 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TMEM53Q6P2H8 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TMEM53Q6P2H8 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TMEM53Q6P2H8 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
TMEM53Q6P2H8 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC15.27■□□□□ 0.04
TMEM53Q6P2H8 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TMEM53Q6P2H8 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC15.27■□□□□ 0.04
TMEM53Q6P2H8 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TMEM53Q6P2H8 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
TMEM53Q6P2H8 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
TMEM53Q6P2H8 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
TMEM53Q6P2H8 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
TMEM53Q6P2H8 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TMEM53Q6P2H8 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
TMEM53Q6P2H8 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TMEM53Q6P2H8 AC007686.3-201ENST00000619017 3487 ntBASIC15.27■□□□□ 0.04
TMEM53Q6P2H8 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TMEM53Q6P2H8 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TMEM53Q6P2H8 DFFB-203ENST00000341385 572 ntTSL 5 BASIC15.27■□□□□ 0.04
TMEM53Q6P2H8 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC15.27■□□□□ 0.04
TMEM53Q6P2H8 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC15.27■□□□□ 0.04
TMEM53Q6P2H8 RBSN-204ENST00000449050 903 ntTSL 2 BASIC15.27■□□□□ 0.04
TMEM53Q6P2H8 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC15.27■□□□□ 0.04
TMEM53Q6P2H8 SKP2-204ENST00000508514 821 ntTSL 3 BASIC15.27■□□□□ 0.04
TMEM53Q6P2H8 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TMEM53Q6P2H8 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC15.27■□□□□ 0.04
TMEM53Q6P2H8 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TMEM53Q6P2H8 TK1-204ENST00000590430 683 ntTSL 3 BASIC15.27■□□□□ 0.04
TMEM53Q6P2H8 AC012313.10-201ENST00000623509 926 ntBASIC15.27■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms