Protein–RNA interactions for Protein: Q494W8

CHRFAM7A, CHRNA7-FAM7A fusion protein, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7AQ494W8 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CHRFAM7AQ494W8 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
CHRFAM7AQ494W8 AC092068.3-201ENST00000587894 2016 ntBASIC14.59□□□□□ -0.07
CHRFAM7AQ494W8 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CHRFAM7AQ494W8 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
CHRFAM7AQ494W8 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CHRFAM7AQ494W8 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
CHRFAM7AQ494W8 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC14.59□□□□□ -0.07
CHRFAM7AQ494W8 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC14.59□□□□□ -0.07
CHRFAM7AQ494W8 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
CHRFAM7AQ494W8 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
CHRFAM7AQ494W8 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CHRFAM7AQ494W8 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
CHRFAM7AQ494W8 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CHRFAM7AQ494W8 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
CHRFAM7AQ494W8 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
CHRFAM7AQ494W8 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC14.58□□□□□ -0.07
CHRFAM7AQ494W8 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC14.58□□□□□ -0.07
CHRFAM7AQ494W8 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC14.58□□□□□ -0.07
CHRFAM7AQ494W8 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
CHRFAM7AQ494W8 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.07
CHRFAM7AQ494W8 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
CHRFAM7AQ494W8 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
CHRFAM7AQ494W8 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC14.58□□□□□ -0.07
CHRFAM7AQ494W8 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.07
CHRFAM7AQ494W8 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CHRFAM7AQ494W8 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CHRFAM7AQ494W8 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CHRFAM7AQ494W8 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC14.58□□□□□ -0.08
CHRFAM7AQ494W8 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CHRFAM7AQ494W8 CD9-202ENST00000382515 1229 ntTSL 5 BASIC14.58□□□□□ -0.08
CHRFAM7AQ494W8 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CHRFAM7AQ494W8 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
CHRFAM7AQ494W8 SYS1-203ENST00000414310 795 ntTSL 3 BASIC14.58□□□□□ -0.08
CHRFAM7AQ494W8 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC14.58□□□□□ -0.08
CHRFAM7AQ494W8 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC14.58□□□□□ -0.08
CHRFAM7AQ494W8 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CHRFAM7AQ494W8 AC124947.2-201ENST00000547118 1133 ntBASIC14.58□□□□□ -0.08
CHRFAM7AQ494W8 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC14.58□□□□□ -0.08
CHRFAM7AQ494W8 MIR4469-201ENST00000583919 79 ntBASIC14.58□□□□□ -0.08
CHRFAM7AQ494W8 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC14.58□□□□□ -0.08
CHRFAM7AQ494W8 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC14.58□□□□□ -0.08
CHRFAM7AQ494W8 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC14.58□□□□□ -0.08
CHRFAM7AQ494W8 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
CHRFAM7AQ494W8 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CHRFAM7AQ494W8 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC14.58□□□□□ -0.08
CHRFAM7AQ494W8 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
CHRFAM7AQ494W8 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC14.58□□□□□ -0.08
CHRFAM7AQ494W8 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC14.58□□□□□ -0.08
CHRFAM7AQ494W8 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CHRFAM7AQ494W8 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
CHRFAM7AQ494W8 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CHRFAM7AQ494W8 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CHRFAM7AQ494W8 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CHRFAM7AQ494W8 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC14.58□□□□□ -0.08
CHRFAM7AQ494W8 AC002310.6-201ENST00000624451 1377 ntBASIC14.58□□□□□ -0.08
CHRFAM7AQ494W8 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CHRFAM7AQ494W8 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
CHRFAM7AQ494W8 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CHRFAM7AQ494W8 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC14.58□□□□□ -0.08
CHRFAM7AQ494W8 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CHRFAM7AQ494W8 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
CHRFAM7AQ494W8 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC14.58□□□□□ -0.08
CHRFAM7AQ494W8 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CHRFAM7AQ494W8 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC14.58□□□□□ -0.08
CHRFAM7AQ494W8 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CHRFAM7AQ494W8 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
CHRFAM7AQ494W8 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CHRFAM7AQ494W8 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CHRFAM7AQ494W8 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CHRFAM7AQ494W8 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CHRFAM7AQ494W8 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CHRFAM7AQ494W8 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CHRFAM7AQ494W8 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC14.57□□□□□ -0.08
CHRFAM7AQ494W8 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CHRFAM7AQ494W8 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CHRFAM7AQ494W8 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
CHRFAM7AQ494W8 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
CHRFAM7AQ494W8 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC14.57□□□□□ -0.08
CHRFAM7AQ494W8 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
CHRFAM7AQ494W8 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC14.57□□□□□ -0.08
CHRFAM7AQ494W8 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CHRFAM7AQ494W8 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CHRFAM7AQ494W8 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CHRFAM7AQ494W8 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC14.57□□□□□ -0.08
CHRFAM7AQ494W8 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC14.57□□□□□ -0.08
CHRFAM7AQ494W8 AC108751.1-201ENST00000490852 363 ntBASIC14.57□□□□□ -0.08
CHRFAM7AQ494W8 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC14.57□□□□□ -0.08
CHRFAM7AQ494W8 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC14.57□□□□□ -0.08
CHRFAM7AQ494W8 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC14.57□□□□□ -0.08
CHRFAM7AQ494W8 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CHRFAM7AQ494W8 AP002472.1-201ENST00000577490 586 ntBASIC14.57□□□□□ -0.08
CHRFAM7AQ494W8 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
CHRFAM7AQ494W8 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
CHRFAM7AQ494W8 AC239800.4-201ENST00000603712 296 ntBASIC14.57□□□□□ -0.08
CHRFAM7AQ494W8 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC14.57□□□□□ -0.08
CHRFAM7AQ494W8 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC14.57□□□□□ -0.08
CHRFAM7AQ494W8 AC006449.5-201ENST00000610658 2098 ntBASIC14.57□□□□□ -0.08
CHRFAM7AQ494W8 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CHRFAM7AQ494W8 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms