Protein–RNA interactions for Protein: Q03692

COL10A1, Collagen alpha-1(X) chain, humanhuman

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL10A1Q03692 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
COL10A1Q03692 AL671710.1-201ENST00000610245 2349 ntBASIC14.04□□□□□ -0.16
COL10A1Q03692 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
COL10A1Q03692 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC14.04□□□□□ -0.16
COL10A1Q03692 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
COL10A1Q03692 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
COL10A1Q03692 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
COL10A1Q03692 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC14.04□□□□□ -0.16
COL10A1Q03692 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
COL10A1Q03692 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
COL10A1Q03692 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
COL10A1Q03692 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
COL10A1Q03692 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
COL10A1Q03692 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
COL10A1Q03692 SNX33P1-201ENST00000592116 1762 ntBASIC14.04□□□□□ -0.16
COL10A1Q03692 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
COL10A1Q03692 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC14.04□□□□□ -0.16
COL10A1Q03692 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
COL10A1Q03692 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC14.03□□□□□ -0.16
COL10A1Q03692 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
COL10A1Q03692 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
COL10A1Q03692 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
COL10A1Q03692 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
COL10A1Q03692 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
COL10A1Q03692 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
COL10A1Q03692 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
COL10A1Q03692 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC14.03□□□□□ -0.16
COL10A1Q03692 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
COL10A1Q03692 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
COL10A1Q03692 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
COL10A1Q03692 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
COL10A1Q03692 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
COL10A1Q03692 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
COL10A1Q03692 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
COL10A1Q03692 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
COL10A1Q03692 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
COL10A1Q03692 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC14.03□□□□□ -0.16
COL10A1Q03692 CRYGEP-201ENST00000412192 528 ntBASIC14.03□□□□□ -0.16
COL10A1Q03692 HCG4-201ENST00000418983 998 ntBASIC14.03□□□□□ -0.16
COL10A1Q03692 CDK2AP2P3-201ENST00000422476 372 ntBASIC14.03□□□□□ -0.16
COL10A1Q03692 AP000347.1-202ENST00000435868 847 ntBASIC14.03□□□□□ -0.16
COL10A1Q03692 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC14.03□□□□□ -0.16
COL10A1Q03692 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC14.03□□□□□ -0.16
COL10A1Q03692 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC14.03□□□□□ -0.16
COL10A1Q03692 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
COL10A1Q03692 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC14.03□□□□□ -0.16
COL10A1Q03692 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
COL10A1Q03692 IGHV3-22-201ENST00000520721 359 ntBASIC14.03□□□□□ -0.16
COL10A1Q03692 CALM1-205ENST00000553542 877 ntTSL 5 BASIC14.03□□□□□ -0.16
COL10A1Q03692 TCAP-202ENST00000578283 583 ntTSL 5 BASIC14.03□□□□□ -0.16
COL10A1Q03692 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC14.03□□□□□ -0.16
COL10A1Q03692 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
COL10A1Q03692 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC14.03□□□□□ -0.16
COL10A1Q03692 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
COL10A1Q03692 PC-214ENST00000628663 1470 ntTSL 5 BASIC14.03□□□□□ -0.16
COL10A1Q03692 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
COL10A1Q03692 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
COL10A1Q03692 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
COL10A1Q03692 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC14.03□□□□□ -0.16
COL10A1Q03692 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
COL10A1Q03692 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC14.03□□□□□ -0.16
COL10A1Q03692 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC14.03□□□□□ -0.16
COL10A1Q03692 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
COL10A1Q03692 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
COL10A1Q03692 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
COL10A1Q03692 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
COL10A1Q03692 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
COL10A1Q03692 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC14.03□□□□□ -0.16
COL10A1Q03692 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
COL10A1Q03692 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC14.03□□□□□ -0.16
COL10A1Q03692 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
COL10A1Q03692 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
COL10A1Q03692 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.16
COL10A1Q03692 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
COL10A1Q03692 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC14.02□□□□□ -0.16
COL10A1Q03692 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
COL10A1Q03692 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
COL10A1Q03692 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC14.02□□□□□ -0.16
COL10A1Q03692 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC14.02□□□□□ -0.16
COL10A1Q03692 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
COL10A1Q03692 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
COL10A1Q03692 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC14.02□□□□□ -0.16
COL10A1Q03692 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC14.02□□□□□ -0.16
COL10A1Q03692 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC14.02□□□□□ -0.16
COL10A1Q03692 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
COL10A1Q03692 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
COL10A1Q03692 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC14.02□□□□□ -0.16
COL10A1Q03692 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC14.02□□□□□ -0.16
COL10A1Q03692 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
COL10A1Q03692 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC14.02□□□□□ -0.16
COL10A1Q03692 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC14.02□□□□□ -0.16
COL10A1Q03692 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
COL10A1Q03692 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
COL10A1Q03692 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
COL10A1Q03692 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC14.02□□□□□ -0.16
COL10A1Q03692 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC14.02□□□□□ -0.16
COL10A1Q03692 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
COL10A1Q03692 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC14.02□□□□□ -0.16
COL10A1Q03692 KRT8P39-201ENST00000396270 1433 ntBASIC14.02□□□□□ -0.16
COL10A1Q03692 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms