Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC14.81□□□□□ -0.04
H3F3AP84243 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
H3F3AP84243 LINC01144-201ENST00000626198 1710 ntBASIC14.81□□□□□ -0.04
H3F3AP84243 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC14.81□□□□□ -0.04
H3F3AP84243 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
H3F3AP84243 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
H3F3AP84243 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
H3F3AP84243 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC14.81□□□□□ -0.04
H3F3AP84243 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
H3F3AP84243 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
H3F3AP84243 PCGF3-213ENST00000620529 1899 ntBASIC14.81□□□□□ -0.04
H3F3AP84243 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
H3F3AP84243 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
H3F3AP84243 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
H3F3AP84243 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
H3F3AP84243 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
H3F3AP84243 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
H3F3AP84243 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
H3F3AP84243 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
H3F3AP84243 CFL1-202ENST00000524553 860 ntTSL 2 BASIC14.81□□□□□ -0.04
H3F3AP84243 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
H3F3AP84243 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC14.81□□□□□ -0.04
H3F3AP84243 AL078644.1-201ENST00000609881 752 ntBASIC14.81□□□□□ -0.04
H3F3AP84243 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
H3F3AP84243 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
H3F3AP84243 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
H3F3AP84243 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC14.81□□□□□ -0.04
H3F3AP84243 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
H3F3AP84243 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
H3F3AP84243 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
H3F3AP84243 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
H3F3AP84243 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC14.81□□□□□ -0.04
H3F3AP84243 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
H3F3AP84243 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
H3F3AP84243 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC14.81□□□□□ -0.04
H3F3AP84243 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
H3F3AP84243 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
H3F3AP84243 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC14.81□□□□□ -0.04
H3F3AP84243 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC14.81□□□□□ -0.04
H3F3AP84243 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC14.81□□□□□ -0.04
H3F3AP84243 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
H3F3AP84243 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
H3F3AP84243 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC14.8□□□□□ -0.04
H3F3AP84243 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
H3F3AP84243 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
H3F3AP84243 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
H3F3AP84243 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
H3F3AP84243 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
H3F3AP84243 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
H3F3AP84243 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
H3F3AP84243 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC14.8□□□□□ -0.04
H3F3AP84243 AC008894.3-201ENST00000624324 3103 ntBASIC14.8□□□□□ -0.04
H3F3AP84243 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
H3F3AP84243 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
H3F3AP84243 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
H3F3AP84243 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
H3F3AP84243 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
H3F3AP84243 VMO1-203ENST00000416307 712 ntTSL 2 BASIC14.8□□□□□ -0.04
H3F3AP84243 ADH5P3-201ENST00000433842 1137 ntBASIC14.8□□□□□ -0.04
H3F3AP84243 FAM58CP-201ENST00000435741 640 ntBASIC14.8□□□□□ -0.04
H3F3AP84243 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC14.8□□□□□ -0.04
H3F3AP84243 YBX1P5-201ENST00000509441 847 ntBASIC14.8□□□□□ -0.04
H3F3AP84243 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC14.8□□□□□ -0.04
H3F3AP84243 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC14.8□□□□□ -0.04
H3F3AP84243 CALM1-205ENST00000553542 877 ntTSL 5 BASIC14.8□□□□□ -0.04
H3F3AP84243 INO80E-210ENST00000567705 880 ntTSL 3 BASIC14.8□□□□□ -0.04
H3F3AP84243 IGHV3OR16-6-201ENST00000568775 360 ntBASIC14.8□□□□□ -0.04
H3F3AP84243 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC14.8□□□□□ -0.04
H3F3AP84243 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC14.8□□□□□ -0.04
H3F3AP84243 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
H3F3AP84243 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC14.8□□□□□ -0.04
H3F3AP84243 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
H3F3AP84243 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
H3F3AP84243 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
H3F3AP84243 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
H3F3AP84243 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
H3F3AP84243 AKAP8P1-201ENST00000434743 1349 ntBASIC14.8□□□□□ -0.04
H3F3AP84243 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
H3F3AP84243 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
H3F3AP84243 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC14.8□□□□□ -0.04
H3F3AP84243 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC14.8□□□□□ -0.04
H3F3AP84243 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
H3F3AP84243 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
H3F3AP84243 ALOX12P2-203ENST00000570921 1945 ntBASIC14.8□□□□□ -0.04
H3F3AP84243 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC14.8□□□□□ -0.04
H3F3AP84243 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
H3F3AP84243 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
H3F3AP84243 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC14.8□□□□□ -0.04
H3F3AP84243 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
H3F3AP84243 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
H3F3AP84243 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
H3F3AP84243 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
H3F3AP84243 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC14.79□□□□□ -0.04
H3F3AP84243 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
H3F3AP84243 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
H3F3AP84243 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
H3F3AP84243 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
H3F3AP84243 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
H3F3AP84243 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC14.79□□□□□ -0.04
H3F3AP84243 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms