Protein–RNA interactions for Protein: P83110

HTRA3, Serine protease HTRA3, humanhuman

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTRA3P83110 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
HTRA3P83110 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HTRA3P83110 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC18.86■□□□□ 0.61
HTRA3P83110 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC18.86■□□□□ 0.61
HTRA3P83110 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
HTRA3P83110 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HTRA3P83110 AC044849.1-201ENST00000519737 1188 ntBASIC18.86■□□□□ 0.61
HTRA3P83110 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC18.86■□□□□ 0.61
HTRA3P83110 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC18.86■□□□□ 0.61
HTRA3P83110 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC18.86■□□□□ 0.61
HTRA3P83110 CYGB-203ENST00000589145 788 ntTSL 3 BASIC18.86■□□□□ 0.61
HTRA3P83110 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
HTRA3P83110 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC18.86■□□□□ 0.61
HTRA3P83110 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC18.86■□□□□ 0.61
HTRA3P83110 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC18.86■□□□□ 0.61
HTRA3P83110 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC18.86■□□□□ 0.61
HTRA3P83110 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC18.86■□□□□ 0.61
HTRA3P83110 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HTRA3P83110 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
HTRA3P83110 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HTRA3P83110 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HTRA3P83110 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC18.85■□□□□ 0.61
HTRA3P83110 ZDHHC4-204ENST00000396709 1485 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
HTRA3P83110 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
HTRA3P83110 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HTRA3P83110 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.85■□□□□ 0.61
HTRA3P83110 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
HTRA3P83110 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC18.85■□□□□ 0.61
HTRA3P83110 LINC00470-210ENST00000584090 1334 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
HTRA3P83110 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HTRA3P83110 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
HTRA3P83110 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC18.85■□□□□ 0.61
HTRA3P83110 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC18.85■□□□□ 0.61
HTRA3P83110 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC18.85■□□□□ 0.61
HTRA3P83110 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
HTRA3P83110 AC025279.2-201ENST00000569730 653 ntBASIC18.85■□□□□ 0.61
HTRA3P83110 DGAT2L7P-201ENST00000602462 744 ntBASIC18.85■□□□□ 0.61
HTRA3P83110 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HTRA3P83110 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.85■□□□□ 0.61
HTRA3P83110 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC18.85■□□□□ 0.61
HTRA3P83110 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
HTRA3P83110 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC18.85■□□□□ 0.61
HTRA3P83110 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC18.84■□□□□ 0.61
HTRA3P83110 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
HTRA3P83110 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC18.84■□□□□ 0.61
HTRA3P83110 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
HTRA3P83110 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
HTRA3P83110 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HTRA3P83110 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.84■□□□□ 0.61
HTRA3P83110 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
HTRA3P83110 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC18.84■□□□□ 0.61
HTRA3P83110 CHCHD2-201ENST00000395422 901 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HTRA3P83110 AC004973.1-201ENST00000413240 635 ntTSL 3 BASIC18.84■□□□□ 0.61
HTRA3P83110 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
HTRA3P83110 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC18.84■□□□□ 0.61
HTRA3P83110 VDAC1P7-201ENST00000462417 847 ntBASIC18.84■□□□□ 0.61
HTRA3P83110 NUP210P1-202ENST00000504322 710 ntBASIC18.84■□□□□ 0.61
HTRA3P83110 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC18.84■□□□□ 0.61
HTRA3P83110 WDR7-208ENST00000589935 544 ntTSL 4 BASIC18.84■□□□□ 0.61
HTRA3P83110 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
HTRA3P83110 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC18.84■□□□□ 0.61
HTRA3P83110 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC18.84■□□□□ 0.61
HTRA3P83110 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HTRA3P83110 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
HTRA3P83110 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC18.84■□□□□ 0.61
HTRA3P83110 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC18.84■□□□□ 0.61
HTRA3P83110 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HTRA3P83110 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HTRA3P83110 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
HTRA3P83110 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
HTRA3P83110 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
HTRA3P83110 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
HTRA3P83110 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
HTRA3P83110 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
HTRA3P83110 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC18.83■□□□□ 0.61
HTRA3P83110 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
HTRA3P83110 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
HTRA3P83110 Z97205.2-201ENST00000564697 1639 ntBASIC18.83■□□□□ 0.61
HTRA3P83110 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC18.83■□□□□ 0.6
HTRA3P83110 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HTRA3P83110 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
HTRA3P83110 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC18.83■□□□□ 0.6
HTRA3P83110 DPM2-202ENST00000373110 738 ntTSL 2 BASIC18.83■□□□□ 0.6
HTRA3P83110 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
HTRA3P83110 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
HTRA3P83110 AL365436.2-201ENST00000434112 526 ntTSL 4 BASIC18.83■□□□□ 0.6
HTRA3P83110 TCERG1L-AS1-201ENST00000436942 472 ntTSL 2 BASIC18.83■□□□□ 0.6
HTRA3P83110 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
HTRA3P83110 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC18.83■□□□□ 0.6
HTRA3P83110 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC18.83■□□□□ 0.6
HTRA3P83110 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
HTRA3P83110 NPM1P43-201ENST00000558669 786 ntBASIC18.83■□□□□ 0.6
HTRA3P83110 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC18.83■□□□□ 0.6
HTRA3P83110 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC18.83■□□□□ 0.6
HTRA3P83110 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC18.83■□□□□ 0.6
HTRA3P83110 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC18.83■□□□□ 0.6
HTRA3P83110 AP001527.2-201ENST00000614441 631 ntBASIC18.83■□□□□ 0.6
HTRA3P83110 AC138649.2-201ENST00000615886 705 ntBASIC18.83■□□□□ 0.6
HTRA3P83110 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC18.83■□□□□ 0.6
HTRA3P83110 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.83■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms