Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PRAMEP78395 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PRAMEP78395 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PRAMEP78395 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PRAMEP78395 AGK-211ENST00000629555 2765 ntTSL 5 BASIC16.76■□□□□ 0.27
PRAMEP78395 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC16.76■□□□□ 0.27
PRAMEP78395 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PRAMEP78395 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC16.76■□□□□ 0.27
PRAMEP78395 WDR53-204ENST00000433160 887 ntTSL 5 BASIC16.76■□□□□ 0.27
PRAMEP78395 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC16.76■□□□□ 0.27
PRAMEP78395 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC16.76■□□□□ 0.27
PRAMEP78395 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC16.76■□□□□ 0.27
PRAMEP78395 LITAF-211ENST00000572255 516 ntTSL 4 BASIC16.76■□□□□ 0.27
PRAMEP78395 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
PRAMEP78395 SLC25A6P4-201ENST00000586535 553 ntBASIC16.76■□□□□ 0.27
PRAMEP78395 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
PRAMEP78395 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC16.76■□□□□ 0.27
PRAMEP78395 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PRAMEP78395 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC16.76■□□□□ 0.27
PRAMEP78395 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC16.76■□□□□ 0.27
PRAMEP78395 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
PRAMEP78395 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC16.76■□□□□ 0.27
PRAMEP78395 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PRAMEP78395 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC16.76■□□□□ 0.27
PRAMEP78395 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PRAMEP78395 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PRAMEP78395 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC16.76■□□□□ 0.27
PRAMEP78395 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
PRAMEP78395 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PRAMEP78395 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC16.76■□□□□ 0.27
PRAMEP78395 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC16.76■□□□□ 0.27
PRAMEP78395 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
PRAMEP78395 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PRAMEP78395 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PRAMEP78395 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PRAMEP78395 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC16.75■□□□□ 0.27
PRAMEP78395 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PRAMEP78395 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PRAMEP78395 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
PRAMEP78395 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PRAMEP78395 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
PRAMEP78395 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PRAMEP78395 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
PRAMEP78395 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PRAMEP78395 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PRAMEP78395 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PRAMEP78395 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
PRAMEP78395 CSF3-203ENST00000394148 622 ntTSL 3 BASIC16.75■□□□□ 0.27
PRAMEP78395 STARD13-205ENST00000439831 945 ntTSL 2 BASIC16.75■□□□□ 0.27
PRAMEP78395 PRSS29P-201ENST00000440800 595 ntBASIC16.75■□□□□ 0.27
PRAMEP78395 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC16.75■□□□□ 0.27
PRAMEP78395 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC16.75■□□□□ 0.27
PRAMEP78395 OR7E47P-204ENST00000575924 449 ntBASIC16.75■□□□□ 0.27
PRAMEP78395 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC16.75■□□□□ 0.27
PRAMEP78395 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC16.75■□□□□ 0.27
PRAMEP78395 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
PRAMEP78395 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PRAMEP78395 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PRAMEP78395 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
PRAMEP78395 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PRAMEP78395 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PRAMEP78395 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PRAMEP78395 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PRAMEP78395 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
PRAMEP78395 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PRAMEP78395 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
PRAMEP78395 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PRAMEP78395 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC16.75■□□□□ 0.27
PRAMEP78395 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
PRAMEP78395 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PRAMEP78395 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PRAMEP78395 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC16.75■□□□□ 0.27
PRAMEP78395 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PRAMEP78395 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
PRAMEP78395 PCDHA1-201ENST00000378133 2726 ntBASIC16.75■□□□□ 0.27
PRAMEP78395 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PRAMEP78395 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC16.75■□□□□ 0.27
PRAMEP78395 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PRAMEP78395 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PRAMEP78395 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC16.74■□□□□ 0.27
PRAMEP78395 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PRAMEP78395 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PRAMEP78395 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PRAMEP78395 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC16.74■□□□□ 0.27
PRAMEP78395 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC16.74■□□□□ 0.27
PRAMEP78395 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PRAMEP78395 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PRAMEP78395 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
PRAMEP78395 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PRAMEP78395 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PRAMEP78395 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PRAMEP78395 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC16.74■□□□□ 0.27
PRAMEP78395 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC16.74■□□□□ 0.27
PRAMEP78395 PENK-208ENST00000523051 772 ntTSL 5 BASIC16.74■□□□□ 0.27
PRAMEP78395 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC16.74■□□□□ 0.27
PRAMEP78395 WT1-AS_2.1-201ENST00000613208 137 ntBASIC16.74■□□□□ 0.27
PRAMEP78395 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PRAMEP78395 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
PRAMEP78395 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PRAMEP78395 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms