Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC15.42■□□□□ 0.06
PER3P56645 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
PER3P56645 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC15.42■□□□□ 0.06
PER3P56645 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PER3P56645 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC15.42■□□□□ 0.06
PER3P56645 AL136379.1-201ENST00000623471 2642 ntBASIC15.42■□□□□ 0.06
PER3P56645 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PER3P56645 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC15.42■□□□□ 0.06
PER3P56645 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PER3P56645 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PER3P56645 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
PER3P56645 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PER3P56645 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
PER3P56645 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC15.42■□□□□ 0.06
PER3P56645 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC15.42■□□□□ 0.06
PER3P56645 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC15.42■□□□□ 0.06
PER3P56645 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PER3P56645 INGX-202ENST00000489074 768 ntBASIC15.42■□□□□ 0.06
PER3P56645 GATB-205ENST00000508611 605 ntTSL 2 BASIC15.42■□□□□ 0.06
PER3P56645 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC15.42■□□□□ 0.06
PER3P56645 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC15.42■□□□□ 0.06
PER3P56645 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC15.42■□□□□ 0.06
PER3P56645 AC022145.2-201ENST00000598203 171 ntBASIC15.42■□□□□ 0.06
PER3P56645 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC15.42■□□□□ 0.06
PER3P56645 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
PER3P56645 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PER3P56645 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC15.42■□□□□ 0.06
PER3P56645 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC15.42■□□□□ 0.06
PER3P56645 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC15.42■□□□□ 0.06
PER3P56645 AC046185.3-201ENST00000623228 1824 ntBASIC15.42■□□□□ 0.06
PER3P56645 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PER3P56645 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
PER3P56645 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PER3P56645 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PER3P56645 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PER3P56645 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC15.42■□□□□ 0.06
PER3P56645 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PER3P56645 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PER3P56645 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PER3P56645 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PER3P56645 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC15.42■□□□□ 0.06
PER3P56645 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
PER3P56645 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
PER3P56645 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC15.42■□□□□ 0.06
PER3P56645 HYMAI-201ENST00000635591 3347 ntBASIC15.42■□□□□ 0.06
PER3P56645 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC15.41■□□□□ 0.06
PER3P56645 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC15.41■□□□□ 0.06
PER3P56645 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC15.41■□□□□ 0.06
PER3P56645 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PER3P56645 AC005052.1-201ENST00000625181 2492 ntBASIC15.41■□□□□ 0.06
PER3P56645 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
PER3P56645 PCDHB17P-201ENST00000539533 2393 ntBASIC15.41■□□□□ 0.06
PER3P56645 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC15.41■□□□□ 0.06
PER3P56645 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
PER3P56645 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PER3P56645 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PER3P56645 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC15.41■□□□□ 0.06
PER3P56645 FER1L4-210ENST00000615531 5998 ntBASIC15.41■□□□□ 0.06
PER3P56645 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PER3P56645 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
PER3P56645 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
PER3P56645 AC005034.1-201ENST00000426657 489 ntBASIC15.41■□□□□ 0.06
PER3P56645 PNKD-204ENST00000436005 978 ntTSL 5 BASIC15.41■□□□□ 0.06
PER3P56645 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC15.41■□□□□ 0.06
PER3P56645 CNN2P2-201ENST00000443536 909 ntBASIC15.41■□□□□ 0.06
PER3P56645 CNN2P3-201ENST00000450201 906 ntBASIC15.41■□□□□ 0.06
PER3P56645 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC15.41■□□□□ 0.06
PER3P56645 AC093214.1-201ENST00000511688 1107 ntBASIC15.41■□□□□ 0.06
PER3P56645 FAM86C2P-203ENST00000528684 1004 ntBASIC15.41■□□□□ 0.06
PER3P56645 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PER3P56645 INO80C-206ENST00000586489 594 ntTSL 3 BASIC15.41■□□□□ 0.06
PER3P56645 AC005498.2-205ENST00000593218 784 ntBASIC15.41■□□□□ 0.06
PER3P56645 AL136317.3-201ENST00000618497 906 ntBASIC15.41■□□□□ 0.06
PER3P56645 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
PER3P56645 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
PER3P56645 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PER3P56645 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
PER3P56645 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PER3P56645 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
PER3P56645 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PER3P56645 AMT-250ENST00000637682 1823 ntTSL 5 BASIC15.4■□□□□ 0.06
PER3P56645 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC15.4■□□□□ 0.06
PER3P56645 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
PER3P56645 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
PER3P56645 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC15.4■□□□□ 0.06
PER3P56645 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PER3P56645 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC15.4■□□□□ 0.06
PER3P56645 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PER3P56645 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
PER3P56645 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC15.4■□□□□ 0.06
PER3P56645 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC15.4■□□□□ 0.06
PER3P56645 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
PER3P56645 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
PER3P56645 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PER3P56645 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC15.4■□□□□ 0.06
PER3P56645 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC15.4■□□□□ 0.06
PER3P56645 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PER3P56645 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PER3P56645 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PER3P56645 EDF1-203ENST00000371649 790 ntTSL 2 BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms