Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 OR4A48P-201ENST00000531359 391 ntBASIC16.5■□□□□ 0.23
NUBP1P53384 AP000812.2-201ENST00000538934 718 ntBASIC16.5■□□□□ 0.23
NUBP1P53384 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC16.5■□□□□ 0.23
NUBP1P53384 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC16.5■□□□□ 0.23
NUBP1P53384 PAM16-204ENST00000571941 674 ntTSL 3 BASIC16.5■□□□□ 0.23
NUBP1P53384 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC16.5■□□□□ 0.23
NUBP1P53384 AC013470.4-201ENST00000619978 986 ntBASIC16.5■□□□□ 0.23
NUBP1P53384 AC073439.1-201ENST00000624121 1774 ntBASIC16.5■□□□□ 0.23
NUBP1P53384 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NUBP1P53384 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NUBP1P53384 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC16.5■□□□□ 0.23
NUBP1P53384 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NUBP1P53384 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC16.5■□□□□ 0.23
NUBP1P53384 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC16.5■□□□□ 0.23
NUBP1P53384 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
NUBP1P53384 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC16.5■□□□□ 0.23
NUBP1P53384 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NUBP1P53384 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NUBP1P53384 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NUBP1P53384 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NUBP1P53384 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
NUBP1P53384 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NUBP1P53384 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC16.49■□□□□ 0.23
NUBP1P53384 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC16.49■□□□□ 0.23
NUBP1P53384 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NUBP1P53384 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC16.49■□□□□ 0.23
NUBP1P53384 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NUBP1P53384 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NUBP1P53384 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NUBP1P53384 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
NUBP1P53384 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NUBP1P53384 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
NUBP1P53384 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
NUBP1P53384 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
NUBP1P53384 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
NUBP1P53384 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
NUBP1P53384 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
NUBP1P53384 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC16.49■□□□□ 0.23
NUBP1P53384 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC16.49■□□□□ 0.23
NUBP1P53384 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
NUBP1P53384 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
NUBP1P53384 MRPL47-202ENST00000392659 673 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
NUBP1P53384 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NUBP1P53384 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
NUBP1P53384 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
NUBP1P53384 YBX1P6-201ENST00000442962 1002 ntBASIC16.49■□□□□ 0.23
NUBP1P53384 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC16.49■□□□□ 0.23
NUBP1P53384 LINC02147-202ENST00000509669 637 ntTSL 3 BASIC16.49■□□□□ 0.23
NUBP1P53384 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC16.49■□□□□ 0.23
NUBP1P53384 TIMM17BP1-201ENST00000545713 516 ntBASIC16.49■□□□□ 0.23
NUBP1P53384 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC16.49■□□□□ 0.23
NUBP1P53384 NAA38-207ENST00000576861 556 ntTSL 3 BASIC16.49■□□□□ 0.23
NUBP1P53384 AC024267.1-201ENST00000582320 895 ntBASIC16.49■□□□□ 0.23
NUBP1P53384 AC136428.4-201ENST00000634254 1155 ntBASIC16.49■□□□□ 0.23
NUBP1P53384 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC16.49■□□□□ 0.23
NUBP1P53384 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
NUBP1P53384 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NUBP1P53384 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
NUBP1P53384 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
NUBP1P53384 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC16.49■□□□□ 0.23
NUBP1P53384 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
NUBP1P53384 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
NUBP1P53384 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NUBP1P53384 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NUBP1P53384 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC16.48■□□□□ 0.23
NUBP1P53384 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
NUBP1P53384 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NUBP1P53384 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
NUBP1P53384 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
NUBP1P53384 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
NUBP1P53384 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
NUBP1P53384 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
NUBP1P53384 PTGES2-AS1-201ENST00000443493 2100 ntBASIC16.48■□□□□ 0.23
NUBP1P53384 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NUBP1P53384 TSN-202ENST00000409193 1436 ntTSL 5 BASIC16.48■□□□□ 0.23
NUBP1P53384 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NUBP1P53384 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NUBP1P53384 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NUBP1P53384 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NUBP1P53384 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC16.48■□□□□ 0.23
NUBP1P53384 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC16.48■□□□□ 0.23
NUBP1P53384 APOA1-205ENST00000375329 927 ntTSL 2 BASIC16.48■□□□□ 0.23
NUBP1P53384 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC16.48■□□□□ 0.23
NUBP1P53384 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC16.48■□□□□ 0.23
NUBP1P53384 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC16.48■□□□□ 0.23
NUBP1P53384 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC16.48■□□□□ 0.23
NUBP1P53384 AC007551.1-201ENST00000457394 519 ntBASIC16.48■□□□□ 0.23
NUBP1P53384 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC16.48■□□□□ 0.23
NUBP1P53384 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
NUBP1P53384 AC108729.1-201ENST00000487812 947 ntBASIC16.48■□□□□ 0.23
NUBP1P53384 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC16.48■□□□□ 0.23
NUBP1P53384 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC16.48■□□□□ 0.23
NUBP1P53384 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC16.48■□□□□ 0.23
NUBP1P53384 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NUBP1P53384 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC16.48■□□□□ 0.23
NUBP1P53384 MNT-208ENST00000575394 606 ntTSL 4 BASIC16.48■□□□□ 0.23
NUBP1P53384 AC040904.1-201ENST00000590850 223 ntBASIC16.48■□□□□ 0.23
NUBP1P53384 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NUBP1P53384 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC16.48■□□□□ 0.23
NUBP1P53384 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms