Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
HMGA2P52926 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC15.12■□□□□ 0.01
HMGA2P52926 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
HMGA2P52926 ARMC10P1-201ENST00000313754 855 ntBASIC15.12■□□□□ 0.01
HMGA2P52926 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HMGA2P52926 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC15.12■□□□□ 0.01
HMGA2P52926 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
HMGA2P52926 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HMGA2P52926 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC15.12■□□□□ 0.01
HMGA2P52926 MSRA-206ENST00000521209 814 ntTSL 3 BASIC15.12■□□□□ 0.01
HMGA2P52926 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC15.12■□□□□ 0.01
HMGA2P52926 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
HMGA2P52926 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC15.12■□□□□ 0.01
HMGA2P52926 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
HMGA2P52926 WT1-AS_2.1-201ENST00000613208 137 ntBASIC15.12■□□□□ 0.01
HMGA2P52926 GGTLC5P-201ENST00000617623 998 ntBASIC15.12■□□□□ 0.01
HMGA2P52926 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
HMGA2P52926 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC15.12■□□□□ 0.01
HMGA2P52926 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
HMGA2P52926 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HMGA2P52926 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC15.12■□□□□ 0.01
HMGA2P52926 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
HMGA2P52926 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HMGA2P52926 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC15.12■□□□□ 0.01
HMGA2P52926 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
HMGA2P52926 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
HMGA2P52926 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
HMGA2P52926 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC15.12■□□□□ 0.01
HMGA2P52926 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
HMGA2P52926 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HMGA2P52926 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
HMGA2P52926 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HMGA2P52926 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC15.11■□□□□ 0.01
HMGA2P52926 AC008677.1-201ENST00000519230 1561 ntBASIC15.11■□□□□ 0.01
HMGA2P52926 AC006504.4-201ENST00000592118 1568 ntBASIC15.11■□□□□ 0.01
HMGA2P52926 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC15.11■□□□□ 0.01
HMGA2P52926 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
HMGA2P52926 AC092919.2-201ENST00000623631 1645 ntBASIC15.11■□□□□ 0.01
HMGA2P52926 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
HMGA2P52926 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC15.11■□□□□ 0.01
HMGA2P52926 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC15.11■□□□□ 0.01
HMGA2P52926 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
HMGA2P52926 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
HMGA2P52926 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
HMGA2P52926 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC15.11■□□□□ 0.01
HMGA2P52926 CDK2AP2P3-201ENST00000422476 372 ntBASIC15.11■□□□□ 0.01
HMGA2P52926 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
HMGA2P52926 STARD13-205ENST00000439831 945 ntTSL 2 BASIC15.11■□□□□ 0.01
HMGA2P52926 MMP17-203ENST00000535004 719 ntTSL 3 BASIC15.11■□□□□ 0.01
HMGA2P52926 SART3-203ENST00000546611 1184 ntBASIC15.11■□□□□ 0.01
HMGA2P52926 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC15.11■□□□□ 0.01
HMGA2P52926 RNF151-202ENST00000569210 853 ntTSL 2 BASIC15.11■□□□□ 0.01
HMGA2P52926 AC138894.3-201ENST00000603787 634 ntBASIC15.11■□□□□ 0.01
HMGA2P52926 AC092119.3-201ENST00000612618 583 ntBASIC15.11■□□□□ 0.01
HMGA2P52926 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC15.11■□□□□ 0.01
HMGA2P52926 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC15.11■□□□□ 0.01
HMGA2P52926 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC15.11■□□□□ 0.01
HMGA2P52926 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HMGA2P52926 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HMGA2P52926 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC15.11■□□□□ 0.01
HMGA2P52926 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
HMGA2P52926 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC15.11■□□□□ 0.01
HMGA2P52926 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
HMGA2P52926 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HMGA2P52926 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HMGA2P52926 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
HMGA2P52926 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC15.11■□□□□ 0.01
HMGA2P52926 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
HMGA2P52926 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
HMGA2P52926 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HMGA2P52926 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HMGA2P52926 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
HMGA2P52926 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC15.1■□□□□ 0.01
HMGA2P52926 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC15.1■□□□□ 0.01
HMGA2P52926 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HMGA2P52926 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HMGA2P52926 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
HMGA2P52926 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC15.1■□□□□ 0.01
HMGA2P52926 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC15.1■□□□□ 0.01
HMGA2P52926 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
HMGA2P52926 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
HMGA2P52926 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC15.1■□□□□ 0.01
HMGA2P52926 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC15.1■□□□□ 0.01
HMGA2P52926 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
HMGA2P52926 LSM5-204ENST00000409909 740 ntTSL 2 BASIC15.1■□□□□ 0.01
HMGA2P52926 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC15.1■□□□□ 0.01
HMGA2P52926 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC15.1■□□□□ 0.01
HMGA2P52926 FGFR3P6-201ENST00000457012 610 ntBASIC15.1■□□□□ 0.01
HMGA2P52926 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC15.1■□□□□ 0.01
HMGA2P52926 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HMGA2P52926 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC15.1■□□□□ 0.01
HMGA2P52926 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HMGA2P52926 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
HMGA2P52926 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HMGA2P52926 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
HMGA2P52926 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
HMGA2P52926 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
HMGA2P52926 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC15.1■□□□□ 0.01
HMGA2P52926 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
HMGA2P52926 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms