Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SMSP52788 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
SMSP52788 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
SMSP52788 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
SMSP52788 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
SMSP52788 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
SMSP52788 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
SMSP52788 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
SMSP52788 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
SMSP52788 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC15.59■□□□□ 0.09
SMSP52788 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
SMSP52788 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC15.59■□□□□ 0.09
SMSP52788 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
SMSP52788 PCDHB17P-201ENST00000539533 2393 ntBASIC15.58■□□□□ 0.09
SMSP52788 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC15.58■□□□□ 0.09
SMSP52788 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
SMSP52788 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
SMSP52788 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.09
SMSP52788 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
SMSP52788 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC15.58■□□□□ 0.09
SMSP52788 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC15.58■□□□□ 0.09
SMSP52788 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.09
SMSP52788 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SMSP52788 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC15.58■□□□□ 0.08
SMSP52788 AL135999.2-201ENST00000622438 1686 ntBASIC15.58■□□□□ 0.08
SMSP52788 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC15.58■□□□□ 0.08
SMSP52788 LINC02199-201ENST00000506655 2702 ntBASIC15.58■□□□□ 0.08
SMSP52788 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
SMSP52788 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SMSP52788 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC15.58■□□□□ 0.08
SMSP52788 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SMSP52788 HTR5BP-201ENST00000430851 1154 ntBASIC15.58■□□□□ 0.08
SMSP52788 SIGLEC30P-201ENST00000455569 941 ntBASIC15.58■□□□□ 0.08
SMSP52788 CYMP-203ENST00000474680 1263 ntBASIC15.58■□□□□ 0.08
SMSP52788 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC15.58■□□□□ 0.08
SMSP52788 MAL2-202ENST00000531508 892 ntTSL 3 BASIC15.58■□□□□ 0.08
SMSP52788 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC15.58■□□□□ 0.08
SMSP52788 MIR3197-201ENST00000582241 73 ntBASIC15.58■□□□□ 0.08
SMSP52788 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC15.58■□□□□ 0.08
SMSP52788 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC15.58■□□□□ 0.08
SMSP52788 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC15.58■□□□□ 0.08
SMSP52788 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC15.58■□□□□ 0.08
SMSP52788 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC15.58■□□□□ 0.08
SMSP52788 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SMSP52788 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
SMSP52788 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC15.58■□□□□ 0.08
SMSP52788 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SMSP52788 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC15.58■□□□□ 0.08
SMSP52788 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
SMSP52788 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SMSP52788 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC15.58■□□□□ 0.08
SMSP52788 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
SMSP52788 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
SMSP52788 FUT8-AS1-201ENST00000621019 1521 ntBASIC15.58■□□□□ 0.08
SMSP52788 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
SMSP52788 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SMSP52788 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC15.58■□□□□ 0.08
SMSP52788 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SMSP52788 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SMSP52788 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
SMSP52788 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SMSP52788 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SMSP52788 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SMSP52788 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SMSP52788 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
SMSP52788 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC15.57■□□□□ 0.08
SMSP52788 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
SMSP52788 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SMSP52788 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC15.57■□□□□ 0.08
SMSP52788 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SMSP52788 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
SMSP52788 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
SMSP52788 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SMSP52788 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC15.57■□□□□ 0.08
SMSP52788 PNMT-202ENST00000394246 821 ntTSL 2 BASIC15.57■□□□□ 0.08
SMSP52788 AL645939.2-201ENST00000427340 991 ntBASIC15.57■□□□□ 0.08
SMSP52788 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
SMSP52788 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SMSP52788 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC15.57■□□□□ 0.08
SMSP52788 CCND1-203ENST00000536559 553 ntTSL 3 BASIC15.57■□□□□ 0.08
SMSP52788 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC15.57■□□□□ 0.08
SMSP52788 TUBB8P12-201ENST00000308911 1335 ntBASIC15.57■□□□□ 0.08
SMSP52788 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SMSP52788 TUBB7P-202ENST00000428444 1305 ntBASIC15.57■□□□□ 0.08
SMSP52788 TUBB8P7-204ENST00000567960 1332 ntBASIC15.57■□□□□ 0.08
SMSP52788 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC15.57■□□□□ 0.08
SMSP52788 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
SMSP52788 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC15.57■□□□□ 0.08
SMSP52788 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC15.57■□□□□ 0.08
SMSP52788 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
SMSP52788 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
SMSP52788 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SMSP52788 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SMSP52788 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
SMSP52788 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
SMSP52788 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SMSP52788 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC15.57■□□□□ 0.08
SMSP52788 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC15.57■□□□□ 0.08
SMSP52788 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SMSP52788 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms