Protein–RNA interactions for Protein: P50747

HLCS, Biotin--protein ligase, humanhuman

Predictions only

Length 726 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLCSP50747 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
HLCSP50747 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
HLCSP50747 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
HLCSP50747 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
HLCSP50747 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC15.9■□□□□ 0.14
HLCSP50747 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
HLCSP50747 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC15.9■□□□□ 0.14
HLCSP50747 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC15.9■□□□□ 0.14
HLCSP50747 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
HLCSP50747 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
HLCSP50747 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC15.9■□□□□ 0.14
HLCSP50747 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
HLCSP50747 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
HLCSP50747 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HLCSP50747 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
HLCSP50747 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
HLCSP50747 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
HLCSP50747 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC15.9■□□□□ 0.14
HLCSP50747 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
HLCSP50747 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
HLCSP50747 AP002414.1-201ENST00000391405 1147 ntBASIC15.9■□□□□ 0.14
HLCSP50747 PTCHD3P3-201ENST00000403073 906 ntBASIC15.9■□□□□ 0.14
HLCSP50747 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
HLCSP50747 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC15.9■□□□□ 0.14
HLCSP50747 BX842568.4-201ENST00000421222 227 ntBASIC15.9■□□□□ 0.14
HLCSP50747 AC007967.2-201ENST00000432613 625 ntBASIC15.9■□□□□ 0.14
HLCSP50747 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC15.9■□□□□ 0.14
HLCSP50747 AC108073.2-201ENST00000464002 357 ntBASIC15.9■□□□□ 0.14
HLCSP50747 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
HLCSP50747 NMU-202ENST00000505262 693 ntTSL 3 BASIC15.9■□□□□ 0.14
HLCSP50747 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC15.9■□□□□ 0.14
HLCSP50747 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC15.9■□□□□ 0.14
HLCSP50747 TK1-204ENST00000590430 683 ntTSL 3 BASIC15.9■□□□□ 0.14
HLCSP50747 AC006538.3-201ENST00000612495 578 ntBASIC15.9■□□□□ 0.14
HLCSP50747 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC15.9■□□□□ 0.14
HLCSP50747 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HLCSP50747 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HLCSP50747 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HLCSP50747 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HLCSP50747 VILL-207ENST00000465644 1857 ntTSL 5 BASIC15.9■□□□□ 0.14
HLCSP50747 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
HLCSP50747 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HLCSP50747 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
HLCSP50747 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC15.9■□□□□ 0.14
HLCSP50747 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC15.9■□□□□ 0.14
HLCSP50747 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HLCSP50747 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
HLCSP50747 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HLCSP50747 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC15.89■□□□□ 0.13
HLCSP50747 AL135999.2-201ENST00000622438 1686 ntBASIC15.89■□□□□ 0.13
HLCSP50747 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HLCSP50747 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
HLCSP50747 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
HLCSP50747 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC15.89■□□□□ 0.13
HLCSP50747 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
HLCSP50747 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC15.89■□□□□ 0.13
HLCSP50747 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
HLCSP50747 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC15.89■□□□□ 0.13
HLCSP50747 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC15.89■□□□□ 0.13
HLCSP50747 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
HLCSP50747 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC15.89■□□□□ 0.13
HLCSP50747 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC15.89■□□□□ 0.13
HLCSP50747 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC15.89■□□□□ 0.13
HLCSP50747 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
HLCSP50747 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
HLCSP50747 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
HLCSP50747 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
HLCSP50747 IMP4-203ENST00000409935 958 ntTSL 5 BASIC15.89■□□□□ 0.13
HLCSP50747 CRYGEP-201ENST00000412192 528 ntBASIC15.89■□□□□ 0.13
HLCSP50747 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC15.89■□□□□ 0.13
HLCSP50747 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
HLCSP50747 PRSS29P-201ENST00000440800 595 ntBASIC15.89■□□□□ 0.13
HLCSP50747 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC15.89■□□□□ 0.13
HLCSP50747 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC15.89■□□□□ 0.13
HLCSP50747 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC15.89■□□□□ 0.13
HLCSP50747 AC092865.5-201ENST00000545435 363 ntBASIC15.89■□□□□ 0.13
HLCSP50747 GGTLC5P-201ENST00000617623 998 ntBASIC15.89■□□□□ 0.13
HLCSP50747 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
HLCSP50747 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
HLCSP50747 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
HLCSP50747 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HLCSP50747 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC15.89■□□□□ 0.13
HLCSP50747 AC099063.4-201ENST00000641099 1602 ntBASIC15.89■□□□□ 0.13
HLCSP50747 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
HLCSP50747 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HLCSP50747 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC15.89■□□□□ 0.13
HLCSP50747 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC15.89■□□□□ 0.13
HLCSP50747 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC15.89■□□□□ 0.13
HLCSP50747 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
HLCSP50747 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC15.88■□□□□ 0.13
HLCSP50747 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
HLCSP50747 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HLCSP50747 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HLCSP50747 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HLCSP50747 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC15.88■□□□□ 0.13
HLCSP50747 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HLCSP50747 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC15.88■□□□□ 0.13
HLCSP50747 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HLCSP50747 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
HLCSP50747 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms