Protein–RNA interactions for Protein: P50613

CDK7, Cyclin-dependent kinase 7, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7P50613 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC18.21■□□□□ 0.51
CDK7P50613 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC18.21■□□□□ 0.51
CDK7P50613 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDK7P50613 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDK7P50613 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CDK7P50613 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC18.21■□□□□ 0.51
CDK7P50613 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CDK7P50613 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDK7P50613 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDK7P50613 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDK7P50613 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDK7P50613 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC18.2■□□□□ 0.5
CDK7P50613 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDK7P50613 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
CDK7P50613 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC18.2■□□□□ 0.5
CDK7P50613 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC18.2■□□□□ 0.5
CDK7P50613 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CDK7P50613 AL671710.1-201ENST00000610245 2349 ntBASIC18.2■□□□□ 0.5
CDK7P50613 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDK7P50613 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC18.2■□□□□ 0.5
CDK7P50613 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDK7P50613 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDK7P50613 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC18.2■□□□□ 0.5
CDK7P50613 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC18.2■□□□□ 0.5
CDK7P50613 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
CDK7P50613 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC18.2■□□□□ 0.5
CDK7P50613 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CDK7P50613 RAB35-202ENST00000534951 939 ntTSL 2 BASIC18.2■□□□□ 0.5
CDK7P50613 APOC4-201ENST00000591600 348 ntTSL 3 BASIC18.2■□□□□ 0.5
CDK7P50613 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC18.2■□□□□ 0.5
CDK7P50613 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
CDK7P50613 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDK7P50613 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDK7P50613 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDK7P50613 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDK7P50613 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC18.2■□□□□ 0.5
CDK7P50613 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDK7P50613 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CDK7P50613 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
CDK7P50613 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.19■□□□□ 0.5
CDK7P50613 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDK7P50613 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDK7P50613 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CDK7P50613 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
CDK7P50613 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
CDK7P50613 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDK7P50613 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDK7P50613 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
CDK7P50613 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CDK7P50613 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDK7P50613 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC18.19■□□□□ 0.5
CDK7P50613 AC022210.1-201ENST00000449856 793 ntBASIC18.19■□□□□ 0.5
CDK7P50613 EML3-212ENST00000494176 2901 ntTSL 2 BASIC18.19■□□□□ 0.5
CDK7P50613 EML3-216ENST00000529309 2909 ntTSL 2 BASIC18.19■□□□□ 0.5
CDK7P50613 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC18.19■□□□□ 0.5
CDK7P50613 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CDK7P50613 RAB43P1-201ENST00000561790 589 ntBASIC18.19■□□□□ 0.5
CDK7P50613 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
CDK7P50613 AC013467.2-201ENST00000605472 835 ntBASIC18.19■□□□□ 0.5
CDK7P50613 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CDK7P50613 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
CDK7P50613 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC18.19■□□□□ 0.5
CDK7P50613 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDK7P50613 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDK7P50613 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDK7P50613 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDK7P50613 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDK7P50613 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDK7P50613 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDK7P50613 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
CDK7P50613 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDK7P50613 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDK7P50613 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC18.18■□□□□ 0.5
CDK7P50613 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CDK7P50613 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CDK7P50613 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDK7P50613 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CDK7P50613 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDK7P50613 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDK7P50613 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CDK7P50613 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
CDK7P50613 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC18.18■□□□□ 0.5
CDK7P50613 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
CDK7P50613 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDK7P50613 MIR658-201ENST00000385210 100 ntBASIC18.18■□□□□ 0.5
CDK7P50613 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC18.18■□□□□ 0.5
CDK7P50613 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CDK7P50613 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC18.18■□□□□ 0.5
CDK7P50613 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC18.18■□□□□ 0.5
CDK7P50613 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC18.18■□□□□ 0.5
CDK7P50613 SRD5A3P1-201ENST00000603021 949 ntBASIC18.18■□□□□ 0.5
CDK7P50613 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CDK7P50613 5S_rRNA.22-201ENST00000614916 106 ntBASIC18.18■□□□□ 0.5
CDK7P50613 AC007431.3-201ENST00000623221 587 ntBASIC18.18■□□□□ 0.5
CDK7P50613 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC18.18■□□□□ 0.5
CDK7P50613 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDK7P50613 AC006277.1-201ENST00000624348 1610 ntBASIC18.18■□□□□ 0.5
CDK7P50613 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDK7P50613 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDK7P50613 AL139384.1-201ENST00000612143 3047 ntBASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 228 ms