Protein–RNA interactions for Protein: P49459

UBE2A, Ubiquitin-conjugating enzyme E2 A, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2AP49459 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
UBE2AP49459 SLC25A1P3-201ENST00000395415 828 ntBASIC10.57□□□□□ -0.72
UBE2AP49459 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC10.57□□□□□ -0.72
UBE2AP49459 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC10.57□□□□□ -0.72
UBE2AP49459 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
UBE2AP49459 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
UBE2AP49459 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC10.57□□□□□ -0.72
UBE2AP49459 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC10.57□□□□□ -0.72
UBE2AP49459 BX005266.1-201ENST00000473402 457 ntBASIC10.57□□□□□ -0.72
UBE2AP49459 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
UBE2AP49459 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC10.57□□□□□ -0.72
UBE2AP49459 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC10.57□□□□□ -0.72
UBE2AP49459 PRR29-207ENST00000580752 458 ntTSL 3 BASIC10.57□□□□□ -0.72
UBE2AP49459 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC10.57□□□□□ -0.72
UBE2AP49459 AL732292.2-201ENST00000609649 430 ntBASIC10.57□□□□□ -0.72
UBE2AP49459 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC10.57□□□□□ -0.72
UBE2AP49459 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
UBE2AP49459 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC10.57□□□□□ -0.72
UBE2AP49459 CACNA1G-230ENST00000514717 6699 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
UBE2AP49459 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
UBE2AP49459 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
UBE2AP49459 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC10.57□□□□□ -0.72
UBE2AP49459 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
UBE2AP49459 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
UBE2AP49459 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
UBE2AP49459 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC10.57□□□□□ -0.72
UBE2AP49459 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC10.57□□□□□ -0.72
UBE2AP49459 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC10.57□□□□□ -0.72
UBE2AP49459 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
UBE2AP49459 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
UBE2AP49459 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
UBE2AP49459 NCF1C-201ENST00000438382 1427 ntBASIC10.57□□□□□ -0.72
UBE2AP49459 SIGLEC16-201ENST00000599858 1437 ntBASIC10.57□□□□□ -0.72
UBE2AP49459 HECTD1-203ENST00000553700 9080 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
UBE2AP49459 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
UBE2AP49459 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
UBE2AP49459 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
UBE2AP49459 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
UBE2AP49459 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC10.57□□□□□ -0.72
UBE2AP49459 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC10.56□□□□□ -0.72
UBE2AP49459 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
UBE2AP49459 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC10.56□□□□□ -0.72
UBE2AP49459 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
UBE2AP49459 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
UBE2AP49459 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
UBE2AP49459 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC10.56□□□□□ -0.72
UBE2AP49459 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC10.56□□□□□ -0.72
UBE2AP49459 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
UBE2AP49459 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC10.56□□□□□ -0.72
UBE2AP49459 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
UBE2AP49459 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC10.56□□□□□ -0.72
UBE2AP49459 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
UBE2AP49459 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC10.56□□□□□ -0.72
UBE2AP49459 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC10.56□□□□□ -0.72
UBE2AP49459 CA12-203ENST00000422263 2556 ntTSL 2 BASIC10.56□□□□□ -0.72
UBE2AP49459 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
UBE2AP49459 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
UBE2AP49459 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC10.56□□□□□ -0.72
UBE2AP49459 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC10.56□□□□□ -0.72
UBE2AP49459 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
UBE2AP49459 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
UBE2AP49459 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC10.56□□□□□ -0.72
UBE2AP49459 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC10.56□□□□□ -0.72
UBE2AP49459 RBM17P3-201ENST00000417687 1192 ntBASIC10.56□□□□□ -0.72
UBE2AP49459 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC10.56□□□□□ -0.72
UBE2AP49459 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC10.56□□□□□ -0.72
UBE2AP49459 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC10.56□□□□□ -0.72
UBE2AP49459 NUS1P1-201ENST00000446295 882 ntBASIC10.56□□□□□ -0.72
UBE2AP49459 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC10.56□□□□□ -0.72
UBE2AP49459 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC10.56□□□□□ -0.72
UBE2AP49459 SCARNA2-201ENST00000458748 420 ntBASIC10.56□□□□□ -0.72
UBE2AP49459 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
UBE2AP49459 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC10.56□□□□□ -0.72
UBE2AP49459 IRF8-202ENST00000562492 946 ntTSL 3 BASIC10.56□□□□□ -0.72
UBE2AP49459 AC091304.2-201ENST00000564639 760 ntBASIC10.56□□□□□ -0.72
UBE2AP49459 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC10.56□□□□□ -0.72
UBE2AP49459 AL139288.1-201ENST00000623748 933 ntBASIC10.56□□□□□ -0.72
UBE2AP49459 AL022326.1-202ENST00000641533 845 ntBASIC10.56□□□□□ -0.72
UBE2AP49459 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
UBE2AP49459 FRMD8P1-201ENST00000440433 1524 ntBASIC10.56□□□□□ -0.72
UBE2AP49459 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC10.56□□□□□ -0.72
UBE2AP49459 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
UBE2AP49459 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
UBE2AP49459 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC10.56□□□□□ -0.72
UBE2AP49459 SETD1B-202ENST00000542440 8185 ntAPPRIS P2 TSL 5 BASIC10.56□□□□□ -0.72
UBE2AP49459 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
UBE2AP49459 AP005117.1-201ENST00000584346 1413 ntBASIC10.56□□□□□ -0.72
UBE2AP49459 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
UBE2AP49459 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
UBE2AP49459 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
UBE2AP49459 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC10.56□□□□□ -0.72
UBE2AP49459 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
UBE2AP49459 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC10.56□□□□□ -0.72
UBE2AP49459 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
UBE2AP49459 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
UBE2AP49459 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
UBE2AP49459 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC10.56□□□□□ -0.72
UBE2AP49459 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
UBE2AP49459 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
UBE2AP49459 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC10.55□□□□□ -0.72
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms