Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC14.78□□□□□ -0.04
SRP9P49458 COPE-211ENST00000600932 1144 ntTSL 5 BASIC14.78□□□□□ -0.04
SRP9P49458 AC064862.7-201ENST00000604520 867 ntBASIC14.78□□□□□ -0.04
SRP9P49458 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC14.78□□□□□ -0.04
SRP9P49458 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
SRP9P49458 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
SRP9P49458 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SRP9P49458 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SRP9P49458 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
SRP9P49458 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC14.78□□□□□ -0.04
SRP9P49458 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SRP9P49458 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SRP9P49458 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SRP9P49458 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC14.78□□□□□ -0.04
SRP9P49458 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC14.78□□□□□ -0.04
SRP9P49458 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SRP9P49458 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
SRP9P49458 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
SRP9P49458 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
SRP9P49458 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SRP9P49458 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.04
SRP9P49458 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
SRP9P49458 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
SRP9P49458 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SRP9P49458 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SRP9P49458 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SRP9P49458 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SRP9P49458 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SRP9P49458 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
SRP9P49458 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
SRP9P49458 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SRP9P49458 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
SRP9P49458 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC14.77□□□□□ -0.04
SRP9P49458 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
SRP9P49458 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC14.77□□□□□ -0.05
SRP9P49458 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC14.77□□□□□ -0.05
SRP9P49458 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
SRP9P49458 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC14.77□□□□□ -0.05
SRP9P49458 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
SRP9P49458 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC14.77□□□□□ -0.05
SRP9P49458 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC14.77□□□□□ -0.05
SRP9P49458 PRYP5-201ENST00000451909 266 ntBASIC14.77□□□□□ -0.05
SRP9P49458 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC14.77□□□□□ -0.05
SRP9P49458 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
SRP9P49458 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC14.77□□□□□ -0.05
SRP9P49458 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
SRP9P49458 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC14.77□□□□□ -0.05
SRP9P49458 NKAPP1-205ENST00000585790 367 ntBASIC14.77□□□□□ -0.05
SRP9P49458 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SRP9P49458 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC14.77□□□□□ -0.05
SRP9P49458 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
SRP9P49458 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC14.77□□□□□ -0.05
SRP9P49458 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
SRP9P49458 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SRP9P49458 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SRP9P49458 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SRP9P49458 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC14.77□□□□□ -0.05
SRP9P49458 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SRP9P49458 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC14.77□□□□□ -0.05
SRP9P49458 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
SRP9P49458 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC14.77□□□□□ -0.05
SRP9P49458 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.05
SRP9P49458 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SRP9P49458 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
SRP9P49458 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SRP9P49458 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
SRP9P49458 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SRP9P49458 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SRP9P49458 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
SRP9P49458 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
SRP9P49458 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
SRP9P49458 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SRP9P49458 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SRP9P49458 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SRP9P49458 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
SRP9P49458 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC14.76□□□□□ -0.05
SRP9P49458 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SRP9P49458 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SRP9P49458 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SRP9P49458 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
SRP9P49458 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SRP9P49458 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SRP9P49458 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SRP9P49458 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
SRP9P49458 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC14.76□□□□□ -0.05
SRP9P49458 AF186996.4-201ENST00000467186 377 ntBASIC14.76□□□□□ -0.05
SRP9P49458 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC14.76□□□□□ -0.05
SRP9P49458 BX005266.1-201ENST00000473402 457 ntBASIC14.76□□□□□ -0.05
SRP9P49458 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC14.76□□□□□ -0.05
SRP9P49458 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC14.76□□□□□ -0.05
SRP9P49458 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC14.76□□□□□ -0.05
SRP9P49458 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC14.76□□□□□ -0.05
SRP9P49458 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC14.76□□□□□ -0.05
SRP9P49458 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SRP9P49458 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
SRP9P49458 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SRP9P49458 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
SRP9P49458 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
SRP9P49458 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SRP9P49458 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms