Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC16.95■□□□□ 0.3
SLC6A4P31645 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC16.95■□□□□ 0.3
SLC6A4P31645 SPTSSB-204ENST00000617024 1292 ntBASIC16.95■□□□□ 0.3
SLC6A4P31645 AC093512.1-201ENST00000617969 520 ntBASIC16.95■□□□□ 0.3
SLC6A4P31645 ORC5-208ENST00000626700 344 ntTSL 3 BASIC16.95■□□□□ 0.3
SLC6A4P31645 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC16.95■□□□□ 0.3
SLC6A4P31645 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC16.95■□□□□ 0.3
SLC6A4P31645 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SLC6A4P31645 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.95■□□□□ 0.3
SLC6A4P31645 NKILA-202ENST00000614771 2598 ntBASIC16.95■□□□□ 0.3
SLC6A4P31645 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC16.95■□□□□ 0.3
SLC6A4P31645 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
SLC6A4P31645 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SLC6A4P31645 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
SLC6A4P31645 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SLC6A4P31645 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SLC6A4P31645 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SLC6A4P31645 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SLC6A4P31645 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLC6A4P31645 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
SLC6A4P31645 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLC6A4P31645 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.94■□□□□ 0.3
SLC6A4P31645 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLC6A4P31645 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
SLC6A4P31645 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLC6A4P31645 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLC6A4P31645 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SLC6A4P31645 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLC6A4P31645 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SLC6A4P31645 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SLC6A4P31645 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
SLC6A4P31645 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLC6A4P31645 HLA-DRB6-201ENST00000411500 1235 ntBASIC16.94■□□□□ 0.3
SLC6A4P31645 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC16.94■□□□□ 0.3
SLC6A4P31645 RARRES2P9-201ENST00000565168 469 ntBASIC16.94■□□□□ 0.3
SLC6A4P31645 AC015911.4-201ENST00000588022 1070 ntBASIC16.94■□□□□ 0.3
SLC6A4P31645 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
SLC6A4P31645 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC16.94■□□□□ 0.3
SLC6A4P31645 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLC6A4P31645 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLC6A4P31645 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC16.94■□□□□ 0.3
SLC6A4P31645 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC16.94■□□□□ 0.3
SLC6A4P31645 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC16.94■□□□□ 0.3
SLC6A4P31645 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
SLC6A4P31645 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC16.94■□□□□ 0.3
SLC6A4P31645 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLC6A4P31645 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLC6A4P31645 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.93■□□□□ 0.3
SLC6A4P31645 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SLC6A4P31645 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
SLC6A4P31645 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SLC6A4P31645 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SLC6A4P31645 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC16.93■□□□□ 0.3
SLC6A4P31645 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SLC6A4P31645 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
SLC6A4P31645 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SLC6A4P31645 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SLC6A4P31645 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SLC6A4P31645 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SLC6A4P31645 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SLC6A4P31645 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SLC6A4P31645 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC16.93■□□□□ 0.3
SLC6A4P31645 HMGN1P19-201ENST00000436976 333 ntBASIC16.93■□□□□ 0.3
SLC6A4P31645 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC16.93■□□□□ 0.3
SLC6A4P31645 FAM86GP-201ENST00000448322 971 ntBASIC16.93■□□□□ 0.3
SLC6A4P31645 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC16.93■□□□□ 0.3
SLC6A4P31645 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC16.93■□□□□ 0.3
SLC6A4P31645 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC16.93■□□□□ 0.3
SLC6A4P31645 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SLC6A4P31645 MIR6080-201ENST00000617359 66 ntBASIC16.93■□□□□ 0.3
SLC6A4P31645 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC16.93■□□□□ 0.3
SLC6A4P31645 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SLC6A4P31645 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
SLC6A4P31645 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
SLC6A4P31645 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC16.93■□□□□ 0.3
SLC6A4P31645 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SLC6A4P31645 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
SLC6A4P31645 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SLC6A4P31645 AC005052.1-201ENST00000625181 2492 ntBASIC16.93■□□□□ 0.3
SLC6A4P31645 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC16.93■□□□□ 0.3
SLC6A4P31645 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SLC6A4P31645 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SLC6A4P31645 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.93■□□□□ 0.3
SLC6A4P31645 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SLC6A4P31645 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SLC6A4P31645 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC6A4P31645 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC6A4P31645 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SLC6A4P31645 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
SLC6A4P31645 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC6A4P31645 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC6A4P31645 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC6A4P31645 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC6A4P31645 ALOX12P2-203ENST00000570921 1945 ntBASIC16.92■□□□□ 0.3
SLC6A4P31645 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC16.92■□□□□ 0.3
SLC6A4P31645 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC16.92■□□□□ 0.3
SLC6A4P31645 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC6A4P31645 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC6A4P31645 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC6A4P31645 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms