Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC14.2□□□□□ -0.14
TNFSF4P23510 AC023511.2-201ENST00000618803 211 ntBASIC14.2□□□□□ -0.14
TNFSF4P23510 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC14.2□□□□□ -0.14
TNFSF4P23510 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
TNFSF4P23510 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
TNFSF4P23510 KRT8P39-201ENST00000396270 1433 ntBASIC14.2□□□□□ -0.14
TNFSF4P23510 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
TNFSF4P23510 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TNFSF4P23510 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC14.2□□□□□ -0.14
TNFSF4P23510 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TNFSF4P23510 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TNFSF4P23510 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
TNFSF4P23510 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TNFSF4P23510 AC084018.2-201ENST00000613093 2607 ntBASIC14.2□□□□□ -0.14
TNFSF4P23510 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
TNFSF4P23510 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TNFSF4P23510 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TNFSF4P23510 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
TNFSF4P23510 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TNFSF4P23510 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
TNFSF4P23510 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TNFSF4P23510 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TNFSF4P23510 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
TNFSF4P23510 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TNFSF4P23510 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
TNFSF4P23510 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
TNFSF4P23510 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
TNFSF4P23510 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC14.19□□□□□ -0.14
TNFSF4P23510 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TNFSF4P23510 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TNFSF4P23510 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TNFSF4P23510 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TNFSF4P23510 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
TNFSF4P23510 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC14.19□□□□□ -0.14
TNFSF4P23510 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
TNFSF4P23510 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TNFSF4P23510 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
TNFSF4P23510 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
TNFSF4P23510 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TNFSF4P23510 MIR1233-2-201ENST00000408138 82 ntBASIC14.19□□□□□ -0.14
TNFSF4P23510 MIR1233-1-201ENST00000408722 82 ntBASIC14.19□□□□□ -0.14
TNFSF4P23510 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC14.19□□□□□ -0.14
TNFSF4P23510 HTR5BP-201ENST00000430851 1154 ntBASIC14.19□□□□□ -0.14
TNFSF4P23510 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC14.19□□□□□ -0.14
TNFSF4P23510 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC14.19□□□□□ -0.14
TNFSF4P23510 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC14.19□□□□□ -0.14
TNFSF4P23510 AP002472.1-201ENST00000577490 586 ntBASIC14.19□□□□□ -0.14
TNFSF4P23510 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TNFSF4P23510 AL009183.1-201ENST00000603760 355 ntBASIC14.19□□□□□ -0.14
TNFSF4P23510 AC091812.2-201ENST00000619081 385 ntBASIC14.19□□□□□ -0.14
TNFSF4P23510 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
TNFSF4P23510 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
TNFSF4P23510 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
TNFSF4P23510 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
TNFSF4P23510 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
TNFSF4P23510 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TNFSF4P23510 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TNFSF4P23510 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
TNFSF4P23510 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
TNFSF4P23510 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TNFSF4P23510 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC14.19□□□□□ -0.14
TNFSF4P23510 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
TNFSF4P23510 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC14.19□□□□□ -0.14
TNFSF4P23510 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
TNFSF4P23510 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
TNFSF4P23510 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TNFSF4P23510 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
TNFSF4P23510 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
TNFSF4P23510 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TNFSF4P23510 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
TNFSF4P23510 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TNFSF4P23510 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TNFSF4P23510 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TNFSF4P23510 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
TNFSF4P23510 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TNFSF4P23510 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC14.18□□□□□ -0.14
TNFSF4P23510 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
TNFSF4P23510 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TNFSF4P23510 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TNFSF4P23510 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
TNFSF4P23510 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
TNFSF4P23510 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TNFSF4P23510 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TNFSF4P23510 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
TNFSF4P23510 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC14.18□□□□□ -0.14
TNFSF4P23510 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TNFSF4P23510 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TNFSF4P23510 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
TNFSF4P23510 GPX1P2-201ENST00000429271 606 ntBASIC14.18□□□□□ -0.14
TNFSF4P23510 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC14.18□□□□□ -0.14
TNFSF4P23510 CCND1-203ENST00000536559 553 ntTSL 3 BASIC14.18□□□□□ -0.14
TNFSF4P23510 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
TNFSF4P23510 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
TNFSF4P23510 AL078644.1-201ENST00000609881 752 ntBASIC14.18□□□□□ -0.14
TNFSF4P23510 AC079781.4-201ENST00000641908 219 ntBASIC14.18□□□□□ -0.14
TNFSF4P23510 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TNFSF4P23510 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TNFSF4P23510 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TNFSF4P23510 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
TNFSF4P23510 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms