Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC14.6□□□□□ -0.07
UBCP0CG48 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC14.6□□□□□ -0.07
UBCP0CG48 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC14.6□□□□□ -0.07
UBCP0CG48 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC14.6□□□□□ -0.07
UBCP0CG48 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
UBCP0CG48 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
UBCP0CG48 AL671710.1-201ENST00000610245 2349 ntBASIC14.6□□□□□ -0.07
UBCP0CG48 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
UBCP0CG48 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
UBCP0CG48 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
UBCP0CG48 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC14.6□□□□□ -0.07
UBCP0CG48 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC14.6□□□□□ -0.07
UBCP0CG48 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC14.6□□□□□ -0.07
UBCP0CG48 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
UBCP0CG48 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC14.6□□□□□ -0.07
UBCP0CG48 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
UBCP0CG48 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
UBCP0CG48 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
UBCP0CG48 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
UBCP0CG48 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
UBCP0CG48 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
UBCP0CG48 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
UBCP0CG48 AL365203.3-201ENST00000609742 2057 ntBASIC14.59□□□□□ -0.07
UBCP0CG48 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
UBCP0CG48 KRT8P39-201ENST00000396270 1433 ntBASIC14.59□□□□□ -0.07
UBCP0CG48 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC14.59□□□□□ -0.07
UBCP0CG48 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
UBCP0CG48 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
UBCP0CG48 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
UBCP0CG48 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
UBCP0CG48 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
UBCP0CG48 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
UBCP0CG48 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
UBCP0CG48 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
UBCP0CG48 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
UBCP0CG48 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC14.59□□□□□ -0.07
UBCP0CG48 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
UBCP0CG48 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
UBCP0CG48 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
UBCP0CG48 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC14.59□□□□□ -0.07
UBCP0CG48 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC14.59□□□□□ -0.07
UBCP0CG48 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
UBCP0CG48 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
UBCP0CG48 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC14.59□□□□□ -0.07
UBCP0CG48 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC14.59□□□□□ -0.07
UBCP0CG48 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC14.59□□□□□ -0.07
UBCP0CG48 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
UBCP0CG48 MIR4492-201ENST00000581627 80 ntBASIC14.59□□□□□ -0.07
UBCP0CG48 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC14.59□□□□□ -0.07
UBCP0CG48 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
UBCP0CG48 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
UBCP0CG48 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
UBCP0CG48 SNX33P1-201ENST00000592116 1762 ntBASIC14.59□□□□□ -0.07
UBCP0CG48 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
UBCP0CG48 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
UBCP0CG48 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
UBCP0CG48 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC14.59□□□□□ -0.07
UBCP0CG48 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
UBCP0CG48 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
UBCP0CG48 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
UBCP0CG48 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC14.59□□□□□ -0.07
UBCP0CG48 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
UBCP0CG48 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
UBCP0CG48 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC14.59□□□□□ -0.07
UBCP0CG48 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC14.59□□□□□ -0.07
UBCP0CG48 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC14.59□□□□□ -0.07
UBCP0CG48 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
UBCP0CG48 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC14.59□□□□□ -0.07
UBCP0CG48 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC14.59□□□□□ -0.07
UBCP0CG48 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
UBCP0CG48 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
UBCP0CG48 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
UBCP0CG48 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC14.58□□□□□ -0.07
UBCP0CG48 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.07
UBCP0CG48 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
UBCP0CG48 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC14.58□□□□□ -0.07
UBCP0CG48 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
UBCP0CG48 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
UBCP0CG48 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
UBCP0CG48 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.07
UBCP0CG48 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC14.58□□□□□ -0.07
UBCP0CG48 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
UBCP0CG48 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.07
UBCP0CG48 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC14.58□□□□□ -0.07
UBCP0CG48 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
UBCP0CG48 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
UBCP0CG48 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
UBCP0CG48 AL031731.1-201ENST00000642131 2094 ntBASIC14.58□□□□□ -0.08
UBCP0CG48 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC14.58□□□□□ -0.08
UBCP0CG48 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
UBCP0CG48 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC14.58□□□□□ -0.08
UBCP0CG48 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC14.58□□□□□ -0.08
UBCP0CG48 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC14.58□□□□□ -0.08
UBCP0CG48 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC14.58□□□□□ -0.08
UBCP0CG48 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC14.58□□□□□ -0.08
UBCP0CG48 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC14.58□□□□□ -0.08
UBCP0CG48 AC087163.2-201ENST00000457299 853 ntBASIC14.58□□□□□ -0.08
UBCP0CG48 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
UBCP0CG48 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC14.58□□□□□ -0.08
UBCP0CG48 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC14.58□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms