Protein–RNA interactions for Protein: P0C875

FAM228B, Protein FAM228B, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228BP0C875 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC17.68■□□□□ 0.42
FAM228BP0C875 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
FAM228BP0C875 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
FAM228BP0C875 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
FAM228BP0C875 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
FAM228BP0C875 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC17.68■□□□□ 0.42
FAM228BP0C875 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC17.68■□□□□ 0.42
FAM228BP0C875 HLA-DQB2-231ENST00000435145 2026 ntBASIC17.68■□□□□ 0.42
FAM228BP0C875 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC17.68■□□□□ 0.42
FAM228BP0C875 AC073648.2-201ENST00000510116 352 ntBASIC17.68■□□□□ 0.42
FAM228BP0C875 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
FAM228BP0C875 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC17.68■□□□□ 0.42
FAM228BP0C875 AL356488.2-201ENST00000602755 427 ntBASIC17.68■□□□□ 0.42
FAM228BP0C875 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC17.68■□□□□ 0.42
FAM228BP0C875 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
FAM228BP0C875 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
FAM228BP0C875 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
FAM228BP0C875 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
FAM228BP0C875 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
FAM228BP0C875 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
FAM228BP0C875 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
FAM228BP0C875 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC17.67■□□□□ 0.42
FAM228BP0C875 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC17.67■□□□□ 0.42
FAM228BP0C875 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
FAM228BP0C875 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
FAM228BP0C875 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
FAM228BP0C875 VILL-207ENST00000465644 1857 ntTSL 5 BASIC17.67■□□□□ 0.42
FAM228BP0C875 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
FAM228BP0C875 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
FAM228BP0C875 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
FAM228BP0C875 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
FAM228BP0C875 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
FAM228BP0C875 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC17.67■□□□□ 0.42
FAM228BP0C875 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC17.67■□□□□ 0.42
FAM228BP0C875 AC018712.1-201ENST00000455767 687 ntBASIC17.67■□□□□ 0.42
FAM228BP0C875 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
FAM228BP0C875 AC020765.3-201ENST00000613051 740 ntBASIC17.67■□□□□ 0.42
FAM228BP0C875 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC17.67■□□□□ 0.42
FAM228BP0C875 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
FAM228BP0C875 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
FAM228BP0C875 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
FAM228BP0C875 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC17.67■□□□□ 0.42
FAM228BP0C875 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
FAM228BP0C875 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
FAM228BP0C875 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
FAM228BP0C875 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
FAM228BP0C875 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
FAM228BP0C875 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
FAM228BP0C875 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
FAM228BP0C875 CDC14C-201ENST00000428251 1719 ntBASIC17.67■□□□□ 0.42
FAM228BP0C875 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
FAM228BP0C875 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
FAM228BP0C875 AC112504.1-201ENST00000623415 1841 ntBASIC17.66■□□□□ 0.42
FAM228BP0C875 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC17.66■□□□□ 0.42
FAM228BP0C875 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
FAM228BP0C875 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
FAM228BP0C875 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
FAM228BP0C875 CENPM-204ENST00000402420 688 ntTSL 5 BASIC17.66■□□□□ 0.42
FAM228BP0C875 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC17.66■□□□□ 0.42
FAM228BP0C875 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
FAM228BP0C875 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC17.66■□□□□ 0.42
FAM228BP0C875 TOLLIP-AS1-201ENST00000530897 939 ntBASIC17.66■□□□□ 0.42
FAM228BP0C875 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC17.66■□□□□ 0.42
FAM228BP0C875 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC17.66■□□□□ 0.42
FAM228BP0C875 AC105339.3-201ENST00000560043 636 ntBASIC17.66■□□□□ 0.42
FAM228BP0C875 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC17.66■□□□□ 0.42
FAM228BP0C875 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
FAM228BP0C875 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
FAM228BP0C875 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
FAM228BP0C875 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC17.66■□□□□ 0.42
FAM228BP0C875 MYB-242ENST00000618728 3545 ntTSL 5 BASIC17.66■□□□□ 0.42
FAM228BP0C875 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
FAM228BP0C875 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
FAM228BP0C875 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
FAM228BP0C875 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
FAM228BP0C875 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
FAM228BP0C875 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
FAM228BP0C875 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
FAM228BP0C875 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC17.65■□□□□ 0.42
FAM228BP0C875 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
FAM228BP0C875 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
FAM228BP0C875 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
FAM228BP0C875 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC17.65■□□□□ 0.42
FAM228BP0C875 LINC02447-202ENST00000501888 2146 ntBASIC17.65■□□□□ 0.42
FAM228BP0C875 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
FAM228BP0C875 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
FAM228BP0C875 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
FAM228BP0C875 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
FAM228BP0C875 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
FAM228BP0C875 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
FAM228BP0C875 STARD13-205ENST00000439831 945 ntTSL 2 BASIC17.65■□□□□ 0.42
FAM228BP0C875 ACTL9-202ENST00000612068 1252 ntBASIC17.65■□□□□ 0.42
FAM228BP0C875 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
FAM228BP0C875 MIR1199-201ENST00000621445 119 ntBASIC17.65■□□□□ 0.42
FAM228BP0C875 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC17.65■□□□□ 0.42
FAM228BP0C875 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC17.65■□□□□ 0.42
FAM228BP0C875 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
FAM228BP0C875 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
FAM228BP0C875 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
FAM228BP0C875 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms