Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 AC073389.1-201ENST00000595595 795 ntBASIC19.84■□□□□ 0.77
CHGBP05060 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC19.84■□□□□ 0.77
CHGBP05060 AC009093.7-201ENST00000623853 1223 ntBASIC19.84■□□□□ 0.77
CHGBP05060 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC19.84■□□□□ 0.77
CHGBP05060 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHGBP05060 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC19.84■□□□□ 0.77
CHGBP05060 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHGBP05060 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHGBP05060 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
CHGBP05060 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
CHGBP05060 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHGBP05060 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CHGBP05060 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CHGBP05060 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CHGBP05060 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC19.83■□□□□ 0.77
CHGBP05060 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CHGBP05060 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC19.83■□□□□ 0.77
CHGBP05060 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
CHGBP05060 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.77
CHGBP05060 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC19.83■□□□□ 0.77
CHGBP05060 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CHGBP05060 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CHGBP05060 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
CHGBP05060 TSEN15P1-201ENST00000423257 515 ntBASIC19.83■□□□□ 0.77
CHGBP05060 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC19.83■□□□□ 0.77
CHGBP05060 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC19.83■□□□□ 0.77
CHGBP05060 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC19.83■□□□□ 0.77
CHGBP05060 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
CHGBP05060 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
CHGBP05060 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CHGBP05060 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
CHGBP05060 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CHGBP05060 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
CHGBP05060 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
CHGBP05060 AL118508.1-201ENST00000613502 2345 ntBASIC19.82■□□□□ 0.76
CHGBP05060 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CHGBP05060 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC19.82■□□□□ 0.76
CHGBP05060 AC005622.1-201ENST00000636801 1703 ntBASIC19.82■□□□□ 0.76
CHGBP05060 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
CHGBP05060 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC19.82■□□□□ 0.76
CHGBP05060 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CHGBP05060 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
CHGBP05060 REXO1L8P-201ENST00000604378 1897 ntBASIC19.82■□□□□ 0.76
CHGBP05060 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CHGBP05060 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC19.82■□□□□ 0.76
CHGBP05060 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC19.82■□□□□ 0.76
CHGBP05060 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
CHGBP05060 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC19.82■□□□□ 0.76
CHGBP05060 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CHGBP05060 AC124067.4-201ENST00000519691 2379 ntBASIC19.82■□□□□ 0.76
CHGBP05060 KRT18P32-201ENST00000424695 1287 ntBASIC19.82■□□□□ 0.76
CHGBP05060 RBPMS2P1-201ENST00000437762 623 ntBASIC19.82■□□□□ 0.76
CHGBP05060 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
CHGBP05060 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC19.82■□□□□ 0.76
CHGBP05060 HLA-J-203ENST00000494367 1087 ntBASIC19.82■□□□□ 0.76
CHGBP05060 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC19.82■□□□□ 0.76
CHGBP05060 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CHGBP05060 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CHGBP05060 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CHGBP05060 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CHGBP05060 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC19.82■□□□□ 0.76
CHGBP05060 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CHGBP05060 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC19.82■□□□□ 0.76
CHGBP05060 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC19.82■□□□□ 0.76
CHGBP05060 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHGBP05060 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CHGBP05060 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHGBP05060 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC19.81■□□□□ 0.76
CHGBP05060 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC19.81■□□□□ 0.76
CHGBP05060 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHGBP05060 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
CHGBP05060 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC19.81■□□□□ 0.76
CHGBP05060 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHGBP05060 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC19.81■□□□□ 0.76
CHGBP05060 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHGBP05060 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
CHGBP05060 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHGBP05060 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC19.81■□□□□ 0.76
CHGBP05060 VMO1-203ENST00000416307 712 ntTSL 2 BASIC19.81■□□□□ 0.76
CHGBP05060 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC19.81■□□□□ 0.76
CHGBP05060 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC19.81■□□□□ 0.76
CHGBP05060 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
CHGBP05060 IGHV3-62-201ENST00000520057 340 ntBASIC19.81■□□□□ 0.76
CHGBP05060 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CHGBP05060 DAD1-205ENST00000543337 501 ntTSL 3 BASIC19.81■□□□□ 0.76
CHGBP05060 AC026150.2-201ENST00000564693 1156 ntBASIC19.81■□□□□ 0.76
CHGBP05060 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC19.81■□□□□ 0.76
CHGBP05060 LINC00628-201ENST00000628516 1289 ntBASIC19.81■□□□□ 0.76
CHGBP05060 AC079781.4-201ENST00000641908 219 ntBASIC19.81■□□□□ 0.76
CHGBP05060 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHGBP05060 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC19.81■□□□□ 0.76
CHGBP05060 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHGBP05060 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CHGBP05060 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHGBP05060 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHGBP05060 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC19.81■□□□□ 0.76
CHGBP05060 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC19.81■□□□□ 0.76
CHGBP05060 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CHGBP05060 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
CHGBP05060 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 65.1 ms