Protein–RNA interactions for Protein: P01906

HLA-DQA2, HLA class II histocompatibility antigen, DQ alpha 2 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2P01906 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC14.95□□□□□ -0.02
HLA-DQA2P01906 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
HLA-DQA2P01906 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
HLA-DQA2P01906 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC14.95□□□□□ -0.02
HLA-DQA2P01906 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC14.95□□□□□ -0.02
HLA-DQA2P01906 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HLA-DQA2P01906 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC14.95□□□□□ -0.02
HLA-DQA2P01906 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC14.95□□□□□ -0.02
HLA-DQA2P01906 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC14.95□□□□□ -0.02
HLA-DQA2P01906 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
HLA-DQA2P01906 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
HLA-DQA2P01906 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
HLA-DQA2P01906 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC14.95□□□□□ -0.02
HLA-DQA2P01906 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC14.95□□□□□ -0.02
HLA-DQA2P01906 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HLA-DQA2P01906 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC14.95□□□□□ -0.02
HLA-DQA2P01906 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
HLA-DQA2P01906 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC14.95□□□□□ -0.02
HLA-DQA2P01906 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
HLA-DQA2P01906 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
HLA-DQA2P01906 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC14.95□□□□□ -0.02
HLA-DQA2P01906 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
HLA-DQA2P01906 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
HLA-DQA2P01906 GCK-209ENST00000616242 2260 ntTSL 5 BASIC14.95□□□□□ -0.02
HLA-DQA2P01906 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
HLA-DQA2P01906 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
HLA-DQA2P01906 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HLA-DQA2P01906 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
HLA-DQA2P01906 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
HLA-DQA2P01906 AC005052.1-201ENST00000625181 2492 ntBASIC14.94□□□□□ -0.02
HLA-DQA2P01906 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC14.94□□□□□ -0.02
HLA-DQA2P01906 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
HLA-DQA2P01906 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC14.94□□□□□ -0.02
HLA-DQA2P01906 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HLA-DQA2P01906 TK2-221ENST00000620035 5060 ntTSL 2 BASIC14.94□□□□□ -0.02
HLA-DQA2P01906 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
HLA-DQA2P01906 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
HLA-DQA2P01906 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
HLA-DQA2P01906 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC14.94□□□□□ -0.02
HLA-DQA2P01906 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
HLA-DQA2P01906 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HLA-DQA2P01906 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
HLA-DQA2P01906 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC14.94□□□□□ -0.02
HLA-DQA2P01906 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HLA-DQA2P01906 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
HLA-DQA2P01906 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC14.94□□□□□ -0.02
HLA-DQA2P01906 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC14.94□□□□□ -0.02
HLA-DQA2P01906 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
HLA-DQA2P01906 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HLA-DQA2P01906 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HLA-DQA2P01906 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HLA-DQA2P01906 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC14.94□□□□□ -0.02
HLA-DQA2P01906 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC14.94□□□□□ -0.02
HLA-DQA2P01906 TSPY19P-201ENST00000418461 509 ntBASIC14.94□□□□□ -0.02
HLA-DQA2P01906 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC14.94□□□□□ -0.02
HLA-DQA2P01906 TSPY18P-201ENST00000441642 509 ntBASIC14.94□□□□□ -0.02
HLA-DQA2P01906 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC14.94□□□□□ -0.02
HLA-DQA2P01906 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC14.94□□□□□ -0.02
HLA-DQA2P01906 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC14.94□□□□□ -0.02
HLA-DQA2P01906 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC14.94□□□□□ -0.02
HLA-DQA2P01906 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC14.94□□□□□ -0.02
HLA-DQA2P01906 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC14.94□□□□□ -0.02
HLA-DQA2P01906 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
HLA-DQA2P01906 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HLA-DQA2P01906 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
HLA-DQA2P01906 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
HLA-DQA2P01906 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
HLA-DQA2P01906 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
HLA-DQA2P01906 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
HLA-DQA2P01906 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HLA-DQA2P01906 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC14.94□□□□□ -0.02
HLA-DQA2P01906 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC14.94□□□□□ -0.02
HLA-DQA2P01906 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
HLA-DQA2P01906 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HLA-DQA2P01906 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HLA-DQA2P01906 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
HLA-DQA2P01906 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HLA-DQA2P01906 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC14.93□□□□□ -0.02
HLA-DQA2P01906 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC14.93□□□□□ -0.02
HLA-DQA2P01906 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HLA-DQA2P01906 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HLA-DQA2P01906 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HLA-DQA2P01906 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
HLA-DQA2P01906 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
HLA-DQA2P01906 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HLA-DQA2P01906 HIST2H3DP1-201ENST00000401004 416 ntBASIC14.93□□□□□ -0.02
HLA-DQA2P01906 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC14.93□□□□□ -0.02
HLA-DQA2P01906 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HLA-DQA2P01906 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HLA-DQA2P01906 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
HLA-DQA2P01906 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC14.93□□□□□ -0.02
HLA-DQA2P01906 FGFR3P6-201ENST00000457012 610 ntBASIC14.93□□□□□ -0.02
HLA-DQA2P01906 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC14.93□□□□□ -0.02
HLA-DQA2P01906 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
HLA-DQA2P01906 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
HLA-DQA2P01906 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC14.93□□□□□ -0.02
HLA-DQA2P01906 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC14.93□□□□□ -0.02
HLA-DQA2P01906 AC013467.2-201ENST00000605472 835 ntBASIC14.93□□□□□ -0.02
HLA-DQA2P01906 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HLA-DQA2P01906 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC14.93□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms