Protein–RNA interactions for Protein: P01574

IFNB1, Interferon beta, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNB1P01574 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC17.21■□□□□ 0.35
IFNB1P01574 NMU-205ENST00000511469 756 ntTSL 3 BASIC17.21■□□□□ 0.35
IFNB1P01574 IRF8-202ENST00000562492 946 ntTSL 3 BASIC17.21■□□□□ 0.35
IFNB1P01574 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC17.21■□□□□ 0.35
IFNB1P01574 AC021087.4-201ENST00000563761 564 ntBASIC17.21■□□□□ 0.35
IFNB1P01574 PAM16-208ENST00000573553 722 ntTSL 2 BASIC17.21■□□□□ 0.35
IFNB1P01574 MIR4492-201ENST00000581627 80 ntBASIC17.21■□□□□ 0.35
IFNB1P01574 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
IFNB1P01574 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
IFNB1P01574 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
IFNB1P01574 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
IFNB1P01574 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC17.21■□□□□ 0.35
IFNB1P01574 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
IFNB1P01574 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
IFNB1P01574 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
IFNB1P01574 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
IFNB1P01574 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
IFNB1P01574 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
IFNB1P01574 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC17.21■□□□□ 0.35
IFNB1P01574 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
IFNB1P01574 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC17.21■□□□□ 0.35
IFNB1P01574 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
IFNB1P01574 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC17.21■□□□□ 0.34
IFNB1P01574 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
IFNB1P01574 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC17.2■□□□□ 0.34
IFNB1P01574 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC17.2■□□□□ 0.34
IFNB1P01574 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
IFNB1P01574 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC17.2■□□□□ 0.34
IFNB1P01574 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
IFNB1P01574 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
IFNB1P01574 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
IFNB1P01574 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
IFNB1P01574 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC17.2■□□□□ 0.34
IFNB1P01574 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
IFNB1P01574 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC17.2■□□□□ 0.34
IFNB1P01574 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
IFNB1P01574 MTHFR-217ENST00000641820 1569 ntBASIC17.2■□□□□ 0.34
IFNB1P01574 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC17.2■□□□□ 0.34
IFNB1P01574 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
IFNB1P01574 HIST2H3DP1-201ENST00000401004 416 ntBASIC17.2■□□□□ 0.34
IFNB1P01574 SAPCD2P3-201ENST00000455031 850 ntBASIC17.2■□□□□ 0.34
IFNB1P01574 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC17.2■□□□□ 0.34
IFNB1P01574 SLC25A6P2-201ENST00000497974 877 ntBASIC17.2■□□□□ 0.34
IFNB1P01574 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
IFNB1P01574 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
IFNB1P01574 AC006557.2-201ENST00000592985 1240 ntBASIC17.2■□□□□ 0.34
IFNB1P01574 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
IFNB1P01574 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC17.2■□□□□ 0.34
IFNB1P01574 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
IFNB1P01574 AL805961.1-202ENST00000641562 540 ntBASIC17.2■□□□□ 0.34
IFNB1P01574 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
IFNB1P01574 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC17.2■□□□□ 0.34
IFNB1P01574 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
IFNB1P01574 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC17.2■□□□□ 0.34
IFNB1P01574 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
IFNB1P01574 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
IFNB1P01574 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC17.2■□□□□ 0.34
IFNB1P01574 KRT8P39-201ENST00000396270 1433 ntBASIC17.2■□□□□ 0.34
IFNB1P01574 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
IFNB1P01574 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
IFNB1P01574 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
IFNB1P01574 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC17.2■□□□□ 0.34
IFNB1P01574 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
IFNB1P01574 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC17.2■□□□□ 0.34
IFNB1P01574 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
IFNB1P01574 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
IFNB1P01574 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
IFNB1P01574 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
IFNB1P01574 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
IFNB1P01574 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
IFNB1P01574 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC17.19■□□□□ 0.34
IFNB1P01574 MYB-242ENST00000618728 3545 ntTSL 5 BASIC17.19■□□□□ 0.34
IFNB1P01574 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
IFNB1P01574 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
IFNB1P01574 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
IFNB1P01574 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
IFNB1P01574 PGR-209ENST00000617858 2816 ntTSL 5 BASIC17.19■□□□□ 0.34
IFNB1P01574 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
IFNB1P01574 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
IFNB1P01574 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
IFNB1P01574 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
IFNB1P01574 LAGE3P1-201ENST00000425356 484 ntBASIC17.19■□□□□ 0.34
IFNB1P01574 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC17.19■□□□□ 0.34
IFNB1P01574 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
IFNB1P01574 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC17.19■□□□□ 0.34
IFNB1P01574 AF238378.1-201ENST00000526806 358 ntBASIC17.19■□□□□ 0.34
IFNB1P01574 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC17.19■□□□□ 0.34
IFNB1P01574 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC17.19■□□□□ 0.34
IFNB1P01574 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
IFNB1P01574 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
IFNB1P01574 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
IFNB1P01574 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
IFNB1P01574 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC17.19■□□□□ 0.34
IFNB1P01574 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
IFNB1P01574 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC17.19■□□□□ 0.34
IFNB1P01574 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
IFNB1P01574 GGT4P-201ENST00000623672 1708 ntBASIC17.18■□□□□ 0.34
IFNB1P01574 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC17.18■□□□□ 0.34
IFNB1P01574 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
IFNB1P01574 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms