Protein–RNA interactions for Protein: O95741

CPNE6, Copine-6, humanhuman

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6O95741 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC16.29■□□□□ 0.2
CPNE6O95741 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC16.29■□□□□ 0.2
CPNE6O95741 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CPNE6O95741 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CPNE6O95741 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CPNE6O95741 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16.29■□□□□ 0.2
CPNE6O95741 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CPNE6O95741 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CPNE6O95741 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CPNE6O95741 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.29■□□□□ 0.2
CPNE6O95741 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
CPNE6O95741 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CPNE6O95741 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CPNE6O95741 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC16.29■□□□□ 0.2
CPNE6O95741 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CPNE6O95741 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CPNE6O95741 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CPNE6O95741 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CPNE6O95741 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CPNE6O95741 AC006449.5-201ENST00000610658 2098 ntBASIC16.28■□□□□ 0.2
CPNE6O95741 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CPNE6O95741 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CPNE6O95741 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CPNE6O95741 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CPNE6O95741 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
CPNE6O95741 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC16.28■□□□□ 0.2
CPNE6O95741 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
CPNE6O95741 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CPNE6O95741 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CPNE6O95741 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC16.28■□□□□ 0.2
CPNE6O95741 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CPNE6O95741 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CPNE6O95741 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC16.28■□□□□ 0.2
CPNE6O95741 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC16.28■□□□□ 0.2
CPNE6O95741 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC16.28■□□□□ 0.2
CPNE6O95741 HCG4-201ENST00000418983 998 ntBASIC16.28■□□□□ 0.2
CPNE6O95741 FAM86GP-201ENST00000448322 971 ntBASIC16.28■□□□□ 0.2
CPNE6O95741 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
CPNE6O95741 AC079140.1-201ENST00000508039 487 ntBASIC16.28■□□□□ 0.2
CPNE6O95741 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC16.28■□□□□ 0.2
CPNE6O95741 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CPNE6O95741 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CPNE6O95741 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CPNE6O95741 RPL28-205ENST00000558131 444 ntTSL 5 BASIC16.28■□□□□ 0.2
CPNE6O95741 AC092364.2-202ENST00000597012 1073 ntBASIC16.28■□□□□ 0.2
CPNE6O95741 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC16.28■□□□□ 0.2
CPNE6O95741 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CPNE6O95741 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC16.28■□□□□ 0.2
CPNE6O95741 EGFEM1P-202ENST00000431685 1563 ntBASIC16.28■□□□□ 0.2
CPNE6O95741 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
CPNE6O95741 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC16.28■□□□□ 0.2
CPNE6O95741 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
CPNE6O95741 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CPNE6O95741 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CPNE6O95741 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CPNE6O95741 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CPNE6O95741 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CPNE6O95741 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CPNE6O95741 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CPNE6O95741 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
CPNE6O95741 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CPNE6O95741 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CPNE6O95741 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
CPNE6O95741 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
CPNE6O95741 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
CPNE6O95741 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC16.27■□□□□ 0.2
CPNE6O95741 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CPNE6O95741 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CPNE6O95741 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CPNE6O95741 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CPNE6O95741 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CPNE6O95741 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CPNE6O95741 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CPNE6O95741 FAM8A3P-201ENST00000427218 844 ntBASIC16.27■□□□□ 0.2
CPNE6O95741 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CPNE6O95741 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC16.27■□□□□ 0.2
CPNE6O95741 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC16.27■□□□□ 0.2
CPNE6O95741 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CPNE6O95741 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CPNE6O95741 TSFM-210ENST00000550559 897 ntTSL 5 BASIC16.27■□□□□ 0.2
CPNE6O95741 AL135744.1-201ENST00000565098 629 ntBASIC16.27■□□□□ 0.2
CPNE6O95741 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC16.27■□□□□ 0.2
CPNE6O95741 AL009183.1-201ENST00000603760 355 ntBASIC16.27■□□□□ 0.2
CPNE6O95741 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CPNE6O95741 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
CPNE6O95741 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC16.27■□□□□ 0.2
CPNE6O95741 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC16.27■□□□□ 0.2
CPNE6O95741 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
CPNE6O95741 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CPNE6O95741 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC16.27■□□□□ 0.19
CPNE6O95741 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CPNE6O95741 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC16.27■□□□□ 0.19
CPNE6O95741 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
CPNE6O95741 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CPNE6O95741 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC16.27■□□□□ 0.19
CPNE6O95741 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
CPNE6O95741 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CPNE6O95741 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
CPNE6O95741 AC016396.2-201ENST00000562575 1417 ntBASIC16.27■□□□□ 0.19
CPNE6O95741 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC16.27■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms