Protein–RNA interactions for Protein: O95206

PCDH8, Protocadherin-8, humanhuman

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8O95206 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC16.53■□□□□ 0.24
PCDH8O95206 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDH8O95206 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDH8O95206 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDH8O95206 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDH8O95206 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
PCDH8O95206 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PCDH8O95206 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDH8O95206 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
PCDH8O95206 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDH8O95206 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDH8O95206 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PCDH8O95206 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PCDH8O95206 AP001094.4-201ENST00000579008 2176 ntBASIC16.53■□□□□ 0.24
PCDH8O95206 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDH8O95206 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
PCDH8O95206 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PCDH8O95206 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PCDH8O95206 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PCDH8O95206 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
PCDH8O95206 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PCDH8O95206 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
PCDH8O95206 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PCDH8O95206 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC16.52■□□□□ 0.24
PCDH8O95206 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC16.52■□□□□ 0.24
PCDH8O95206 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
PCDH8O95206 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC16.52■□□□□ 0.24
PCDH8O95206 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC16.52■□□□□ 0.24
PCDH8O95206 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PCDH8O95206 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
PCDH8O95206 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
PCDH8O95206 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PCDH8O95206 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC16.52■□□□□ 0.24
PCDH8O95206 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
PCDH8O95206 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
PCDH8O95206 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC16.52■□□□□ 0.24
PCDH8O95206 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PCDH8O95206 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC16.52■□□□□ 0.24
PCDH8O95206 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PCDH8O95206 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PCDH8O95206 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PCDH8O95206 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PCDH8O95206 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
PCDH8O95206 CD81-202ENST00000381036 880 ntTSL 3 BASIC16.52■□□□□ 0.24
PCDH8O95206 BAD-202ENST00000394531 631 ntTSL 3 BASIC16.52■□□□□ 0.24
PCDH8O95206 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC16.52■□□□□ 0.24
PCDH8O95206 AC142381.1-201ENST00000426099 345 ntBASIC16.52■□□□□ 0.24
PCDH8O95206 FAM8A3P-201ENST00000427218 844 ntBASIC16.52■□□□□ 0.24
PCDH8O95206 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC16.52■□□□□ 0.24
PCDH8O95206 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC16.52■□□□□ 0.24
PCDH8O95206 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC16.52■□□□□ 0.24
PCDH8O95206 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC16.52■□□□□ 0.24
PCDH8O95206 BAD-207ENST00000544785 525 ntTSL 3 BASIC16.52■□□□□ 0.24
PCDH8O95206 SPCS2P1-201ENST00000561636 679 ntBASIC16.52■□□□□ 0.24
PCDH8O95206 QPRT-203ENST00000562473 579 ntTSL 3 BASIC16.52■□□□□ 0.24
PCDH8O95206 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC16.52■□□□□ 0.24
PCDH8O95206 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC16.52■□□□□ 0.24
PCDH8O95206 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
PCDH8O95206 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC16.52■□□□□ 0.24
PCDH8O95206 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC16.52■□□□□ 0.24
PCDH8O95206 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PCDH8O95206 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
PCDH8O95206 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC16.52■□□□□ 0.23
PCDH8O95206 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
PCDH8O95206 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
PCDH8O95206 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
PCDH8O95206 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
PCDH8O95206 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
PCDH8O95206 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDH8O95206 AC073439.1-201ENST00000624121 1774 ntBASIC16.51■□□□□ 0.23
PCDH8O95206 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
PCDH8O95206 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PCDH8O95206 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDH8O95206 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC16.51■□□□□ 0.23
PCDH8O95206 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC16.51■□□□□ 0.23
PCDH8O95206 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC16.51■□□□□ 0.23
PCDH8O95206 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PCDH8O95206 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PCDH8O95206 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC16.51■□□□□ 0.23
PCDH8O95206 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDH8O95206 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDH8O95206 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
PCDH8O95206 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDH8O95206 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC16.51■□□□□ 0.23
PCDH8O95206 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC16.51■□□□□ 0.23
PCDH8O95206 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PCDH8O95206 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDH8O95206 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDH8O95206 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC16.51■□□□□ 0.23
PCDH8O95206 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC16.51■□□□□ 0.23
PCDH8O95206 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC16.51■□□□□ 0.23
PCDH8O95206 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
PCDH8O95206 IGHV3-42-201ENST00000520410 361 ntBASIC16.51■□□□□ 0.23
PCDH8O95206 AC140878.1-201ENST00000565277 250 ntBASIC16.51■□□□□ 0.23
PCDH8O95206 MIR4453-201ENST00000584019 89 ntBASIC16.51■□□□□ 0.23
PCDH8O95206 AC073389.1-201ENST00000595595 795 ntBASIC16.51■□□□□ 0.23
PCDH8O95206 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC16.51■□□□□ 0.23
PCDH8O95206 AC003101.2-201ENST00000612557 442 ntBASIC16.51■□□□□ 0.23
PCDH8O95206 AL139011.1-202ENST00000642063 584 ntBASIC16.51■□□□□ 0.23
PCDH8O95206 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms