Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
BEST1O76090 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
BEST1O76090 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
BEST1O76090 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
BEST1O76090 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC17.33■□□□□ 0.36
BEST1O76090 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC17.33■□□□□ 0.36
BEST1O76090 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
BEST1O76090 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC17.33■□□□□ 0.36
BEST1O76090 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
BEST1O76090 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC17.33■□□□□ 0.36
BEST1O76090 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.33■□□□□ 0.36
BEST1O76090 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
BEST1O76090 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC17.33■□□□□ 0.36
BEST1O76090 LINC01144-201ENST00000626198 1710 ntBASIC17.33■□□□□ 0.36
BEST1O76090 AC005622.1-201ENST00000636801 1703 ntBASIC17.33■□□□□ 0.36
BEST1O76090 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
BEST1O76090 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC17.32■□□□□ 0.36
BEST1O76090 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC17.32■□□□□ 0.36
BEST1O76090 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
BEST1O76090 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
BEST1O76090 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC17.32■□□□□ 0.36
BEST1O76090 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
BEST1O76090 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
BEST1O76090 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
BEST1O76090 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
BEST1O76090 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC17.32■□□□□ 0.36
BEST1O76090 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
BEST1O76090 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC17.32■□□□□ 0.36
BEST1O76090 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC17.32■□□□□ 0.36
BEST1O76090 AL645939.2-201ENST00000427340 991 ntBASIC17.32■□□□□ 0.36
BEST1O76090 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC17.32■□□□□ 0.36
BEST1O76090 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC17.32■□□□□ 0.36
BEST1O76090 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC17.32■□□□□ 0.36
BEST1O76090 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
BEST1O76090 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
BEST1O76090 SPTSSB-204ENST00000617024 1292 ntBASIC17.32■□□□□ 0.36
BEST1O76090 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC17.32■□□□□ 0.36
BEST1O76090 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC17.32■□□□□ 0.36
BEST1O76090 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC17.32■□□□□ 0.36
BEST1O76090 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC17.32■□□□□ 0.36
BEST1O76090 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
BEST1O76090 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
BEST1O76090 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC17.32■□□□□ 0.36
BEST1O76090 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
BEST1O76090 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
BEST1O76090 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC17.32■□□□□ 0.36
BEST1O76090 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC17.32■□□□□ 0.36
BEST1O76090 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
BEST1O76090 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
BEST1O76090 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
BEST1O76090 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
BEST1O76090 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
BEST1O76090 AC008677.1-201ENST00000519230 1561 ntBASIC17.32■□□□□ 0.36
BEST1O76090 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
BEST1O76090 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC17.32■□□□□ 0.36
BEST1O76090 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
BEST1O76090 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
BEST1O76090 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
BEST1O76090 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC17.31■□□□□ 0.36
BEST1O76090 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
BEST1O76090 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
BEST1O76090 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC17.31■□□□□ 0.36
BEST1O76090 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC17.31■□□□□ 0.36
BEST1O76090 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
BEST1O76090 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC17.31■□□□□ 0.36
BEST1O76090 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
BEST1O76090 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC17.31■□□□□ 0.36
BEST1O76090 HNRNPFP1-201ENST00000391730 1133 ntBASIC17.31■□□□□ 0.36
BEST1O76090 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC17.31■□□□□ 0.36
BEST1O76090 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC17.31■□□□□ 0.36
BEST1O76090 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC17.31■□□□□ 0.36
BEST1O76090 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC17.31■□□□□ 0.36
BEST1O76090 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
BEST1O76090 RFPL4AP1-201ENST00000530883 850 ntBASIC17.31■□□□□ 0.36
BEST1O76090 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
BEST1O76090 VPS29-207ENST00000549970 818 ntTSL 3 BASIC17.31■□□□□ 0.36
BEST1O76090 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
BEST1O76090 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC17.31■□□□□ 0.36
BEST1O76090 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC17.31■□□□□ 0.36
BEST1O76090 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC17.31■□□□□ 0.36
BEST1O76090 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC17.31■□□□□ 0.36
BEST1O76090 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
BEST1O76090 AL662844.4-201ENST00000606367 2838 ntBASIC17.31■□□□□ 0.36
BEST1O76090 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
BEST1O76090 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
BEST1O76090 ME2P1-201ENST00000426028 1970 ntBASIC17.31■□□□□ 0.36
BEST1O76090 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
BEST1O76090 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
BEST1O76090 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC17.31■□□□□ 0.36
BEST1O76090 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC17.31■□□□□ 0.36
BEST1O76090 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
BEST1O76090 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
BEST1O76090 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
BEST1O76090 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
BEST1O76090 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
BEST1O76090 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
BEST1O76090 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
BEST1O76090 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
BEST1O76090 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
BEST1O76090 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms