Protein–RNA interactions for Protein: O43927

CXCL13, C-X-C motif chemokine 13, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL13O43927 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CXCL13O43927 URGCP-206ENST00000446958 365 ntTSL 2 BASIC14.83□□□□□ -0.04
CXCL13O43927 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC14.83□□□□□ -0.04
CXCL13O43927 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC14.83□□□□□ -0.04
CXCL13O43927 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CXCL13O43927 RNF34-208ENST00000555076 593 ntTSL 3 BASIC14.83□□□□□ -0.04
CXCL13O43927 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC14.83□□□□□ -0.04
CXCL13O43927 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC14.83□□□□□ -0.04
CXCL13O43927 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CXCL13O43927 AC079328.2-201ENST00000561241 3354 ntBASIC14.83□□□□□ -0.04
CXCL13O43927 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
CXCL13O43927 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC14.83□□□□□ -0.04
CXCL13O43927 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CXCL13O43927 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CXCL13O43927 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CXCL13O43927 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
CXCL13O43927 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
CXCL13O43927 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
CXCL13O43927 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
CXCL13O43927 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC14.82□□□□□ -0.04
CXCL13O43927 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC14.82□□□□□ -0.04
CXCL13O43927 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
CXCL13O43927 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CXCL13O43927 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CXCL13O43927 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CXCL13O43927 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CXCL13O43927 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
CXCL13O43927 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
CXCL13O43927 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CXCL13O43927 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC14.82□□□□□ -0.04
CXCL13O43927 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CXCL13O43927 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CXCL13O43927 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
CXCL13O43927 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CXCL13O43927 INO80E-210ENST00000567705 880 ntTSL 3 BASIC14.82□□□□□ -0.04
CXCL13O43927 AL138918.1-201ENST00000568306 659 ntBASIC14.82□□□□□ -0.04
CXCL13O43927 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC14.82□□□□□ -0.04
CXCL13O43927 AC027307.2-201ENST00000591252 911 ntBASIC14.82□□□□□ -0.04
CXCL13O43927 AC020765.3-201ENST00000613051 740 ntBASIC14.82□□□□□ -0.04
CXCL13O43927 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC14.82□□□□□ -0.04
CXCL13O43927 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CXCL13O43927 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
CXCL13O43927 AC020916.1-201ENST00000587762 1774 ntBASIC14.82□□□□□ -0.04
CXCL13O43927 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CXCL13O43927 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
CXCL13O43927 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
CXCL13O43927 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CXCL13O43927 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CXCL13O43927 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CXCL13O43927 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
CXCL13O43927 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
CXCL13O43927 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CXCL13O43927 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC14.82□□□□□ -0.04
CXCL13O43927 UXT-AS1-201ENST00000590504 1525 ntBASIC14.82□□□□□ -0.04
CXCL13O43927 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CXCL13O43927 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CXCL13O43927 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CXCL13O43927 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC14.81□□□□□ -0.04
CXCL13O43927 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC14.81□□□□□ -0.04
CXCL13O43927 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CXCL13O43927 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC14.81□□□□□ -0.04
CXCL13O43927 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC14.81□□□□□ -0.04
CXCL13O43927 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC14.81□□□□□ -0.04
CXCL13O43927 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC14.81□□□□□ -0.04
CXCL13O43927 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
CXCL13O43927 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC14.81□□□□□ -0.04
CXCL13O43927 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CXCL13O43927 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CXCL13O43927 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CXCL13O43927 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CXCL13O43927 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC14.81□□□□□ -0.04
CXCL13O43927 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
CXCL13O43927 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC14.81□□□□□ -0.04
CXCL13O43927 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CXCL13O43927 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC14.81□□□□□ -0.04
CXCL13O43927 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC14.81□□□□□ -0.04
CXCL13O43927 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CXCL13O43927 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
CXCL13O43927 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
CXCL13O43927 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC14.81□□□□□ -0.04
CXCL13O43927 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC14.81□□□□□ -0.04
CXCL13O43927 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC14.81□□□□□ -0.04
CXCL13O43927 METTL23-205ENST00000588302 925 ntTSL 5 BASIC14.81□□□□□ -0.04
CXCL13O43927 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC14.81□□□□□ -0.04
CXCL13O43927 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC14.81□□□□□ -0.04
CXCL13O43927 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CXCL13O43927 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
CXCL13O43927 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC14.81□□□□□ -0.04
CXCL13O43927 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC14.81□□□□□ -0.04
CXCL13O43927 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CXCL13O43927 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
CXCL13O43927 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC14.81□□□□□ -0.04
CXCL13O43927 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
CXCL13O43927 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC14.81□□□□□ -0.04
CXCL13O43927 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC14.81□□□□□ -0.04
CXCL13O43927 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CXCL13O43927 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
CXCL13O43927 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
CXCL13O43927 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CXCL13O43927 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms