Protein–RNA interactions for Protein: O43837

IDH3B, Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial, humanhuman

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3BO43837 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
IDH3BO43837 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
IDH3BO43837 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC15.31■□□□□ 0.04
IDH3BO43837 IER3-202ENST00000376377 1350 ntBASIC15.31■□□□□ 0.04
IDH3BO43837 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC15.31■□□□□ 0.04
IDH3BO43837 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
IDH3BO43837 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
IDH3BO43837 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
IDH3BO43837 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
IDH3BO43837 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
IDH3BO43837 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
IDH3BO43837 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
IDH3BO43837 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC15.31■□□□□ 0.04
IDH3BO43837 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC15.31■□□□□ 0.04
IDH3BO43837 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
IDH3BO43837 AC097637.2-201ENST00000624096 1997 ntBASIC15.31■□□□□ 0.04
IDH3BO43837 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
IDH3BO43837 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
IDH3BO43837 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
IDH3BO43837 AC126177.1-201ENST00000547829 2218 ntBASIC15.31■□□□□ 0.04
IDH3BO43837 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
IDH3BO43837 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
IDH3BO43837 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC15.31■□□□□ 0.04
IDH3BO43837 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC15.31■□□□□ 0.04
IDH3BO43837 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC15.31■□□□□ 0.04
IDH3BO43837 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
IDH3BO43837 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
IDH3BO43837 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
IDH3BO43837 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
IDH3BO43837 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
IDH3BO43837 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
IDH3BO43837 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
IDH3BO43837 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
IDH3BO43837 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
IDH3BO43837 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
IDH3BO43837 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
IDH3BO43837 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
IDH3BO43837 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
IDH3BO43837 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
IDH3BO43837 TLE1-202ENST00000376484 666 ntTSL 3 BASIC15.3■□□□□ 0.04
IDH3BO43837 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
IDH3BO43837 AP002414.1-201ENST00000391405 1147 ntBASIC15.3■□□□□ 0.04
IDH3BO43837 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
IDH3BO43837 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
IDH3BO43837 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
IDH3BO43837 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
IDH3BO43837 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC15.3■□□□□ 0.04
IDH3BO43837 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
IDH3BO43837 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
IDH3BO43837 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
IDH3BO43837 S100A2-206ENST00000497140 697 ntTSL 2 BASIC15.3■□□□□ 0.04
IDH3BO43837 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
IDH3BO43837 AC104819.1-201ENST00000504587 486 ntBASIC15.3■□□□□ 0.04
IDH3BO43837 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
IDH3BO43837 AC074051.2-201ENST00000565115 352 ntBASIC15.3■□□□□ 0.04
IDH3BO43837 AC012615.1-201ENST00000565797 1299 ntBASIC15.3■□□□□ 0.04
IDH3BO43837 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
IDH3BO43837 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
IDH3BO43837 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC15.3■□□□□ 0.04
IDH3BO43837 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
IDH3BO43837 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC15.3■□□□□ 0.04
IDH3BO43837 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC15.3■□□□□ 0.04
IDH3BO43837 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC15.3■□□□□ 0.04
IDH3BO43837 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
IDH3BO43837 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
IDH3BO43837 AL590326.2-201ENST00000625139 305 ntBASIC15.3■□□□□ 0.04
IDH3BO43837 AC148477.5-201ENST00000625164 1645 ntBASIC15.3■□□□□ 0.04
IDH3BO43837 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
IDH3BO43837 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
IDH3BO43837 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
IDH3BO43837 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
IDH3BO43837 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
IDH3BO43837 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
IDH3BO43837 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
IDH3BO43837 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
IDH3BO43837 AL645728.1-201ENST00000366221 2101 ntBASIC15.29■□□□□ 0.04
IDH3BO43837 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC15.29■□□□□ 0.04
IDH3BO43837 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
IDH3BO43837 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
IDH3BO43837 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
IDH3BO43837 LINC00895-201ENST00000629028 1637 ntBASIC15.29■□□□□ 0.04
IDH3BO43837 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
IDH3BO43837 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
IDH3BO43837 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
IDH3BO43837 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
IDH3BO43837 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
IDH3BO43837 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
IDH3BO43837 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
IDH3BO43837 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
IDH3BO43837 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
IDH3BO43837 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
IDH3BO43837 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
IDH3BO43837 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
IDH3BO43837 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
IDH3BO43837 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
IDH3BO43837 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
IDH3BO43837 ISCU-203ENST00000431221 799 ntTSL 2 BASIC15.29■□□□□ 0.04
IDH3BO43837 THAP5-204ENST00000438865 868 ntTSL 2 BASIC15.29■□□□□ 0.04
IDH3BO43837 HLA-J-202ENST00000469281 1241 ntBASIC15.29■□□□□ 0.04
IDH3BO43837 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms